Factsheet for PGSC0003DMT400041690

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 7
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g008960.1.1	Tomato	plasma membrane	98.84	98.84
VIT_00s0646g00030.t01	Wine grape	cytosol	53.97	93.41
VIT_00s0634g00030.t01	Wine grape	cytosol	34.27	88.09
VIT_00s0641g00010.t01	Wine grape	cytosol	51.99	86.5
PGSC0003DMT400056093	Potato	plasma membrane	84.44	84.44
KRH59316	Soybean	plasma membrane	81.29	80.49
KRH43169	Soybean	plasma membrane	81.13	80.33
OQU91137	Sorghum	plasma membrane	60.93	77.31
CDX85768	Canola	plasma membrane	77.48	76.6
Bra028592.1-P	Field mustard	plasma membrane	77.48	76.6
CDY40089	Canola	plasma membrane	77.15	76.27
AT5G10290.1	Thale cress	plasma membrane	76.49	75.37
GSMUA_Achr8P23480_001	Banana	plasma membrane	74.83	74.96
Bra024369.1-P	Field mustard	plasma membrane	69.37	74.56
KRG97568	Soybean	plasma membrane	74.67	74.42
TraesCS3B01G334400.2	Wheat	plasma membrane	74.17	74.17
TraesCS3D01G299800.1	Wheat	plasma membrane	74.17	74.05
CDY08807	Canola	plasma membrane	74.17	73.68
CDY55159	Canola	extracellular, plasma membrane, vacuole	74.17	73.68
KRH31305	Soybean	plasma membrane	75.83	72.35
Os02t0283800-01	Rice	plasma membrane	72.19	71.83
Zm00001d015971_P004	Maize	plasma membrane	72.02	70.39
AT5G65240.2	Thale cress	plasma membrane	74.01	69.84
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	23.84	69.23
EES04934	Sorghum	plasma membrane	70.86	68.7
TraesCS3A01G302200.1	Wheat	plastid	70.36	65.38
Zm00001d033652_P002	Maize	plasma membrane	73.34	64.96
HORVU3Hr1G073960.5	Barley	plastid	74.17	61.45
PGSC0003DMT400059959	Potato	plasma membrane	57.45	56.33
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	47.52	54.67
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	46.85	54.63
GSMUA_Achr2P22230_001	Banana	plasma membrane	63.58	53.04
PGSC0003DMT400070819	Potato	plasma membrane	53.64	51.1
PGSC0003DMT400019924	Potato	cytosol	48.34	48.11
PGSC0003DMT400019446	Potato	plasma membrane	49.17	47.83
PGSC0003DMT400007454	Potato	plasma membrane	47.35	46.13
PGSC0003DMT400035086	Potato	plasma membrane	45.2	45.5
PGSC0003DMT400028991	Potato	plasma membrane	47.35	45.32
PGSC0003DMT400026062	Potato	plasma membrane	49.17	44.73
PGSC0003DMT400073093	Potato	plasma membrane	45.03	43.52
PGSC0003DMT400018244	Potato	plasma membrane	20.36	35.04
PGSC0003DMT400065173	Potato	plasma membrane	34.11	34.28

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102596011	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1BBT6	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
EnsemblPlantsGene:PGSC0003DMG400016164	PGSC:PGSC0003DMG400016164	EnsemblPlants:PGSC0003DMT400041690	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000294FF4A	RefSeq:XP_006353231.1
SEG:seg	:	:	:	:	:

Description

LRR receptor-like serine/threonine-protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400016164]

Coordinates

chr11:+:2880115..2888303

Molecular Weight (calculated)

67561.2 Da

IEP (calculated)

6.168

GRAVY (calculated)

-0.224

Length

604 amino acids

Sequence
(BLAST)

001: MELFLAILIL ACLYSSVSPD QQGDALFALK SSLNASNDQL SDWNQNQVNP CTWSKITCDD NSNVLMVSLS NMGFTGTLTP RLGVLVHLNT LSLQGNGITG
101: KIPEALGNLT SLTMLDLEKN SLSGEIPASL GNLKKLQFLF LSQNNLSGTI PESLSGLPNL INLQLALNDL TGKVPDSLFQ VPKYNFSENH LNCGLNFSRR
201: CVSDSEGSPS KSKTGLVIGI VGGFLGIILL GGLMLFFWRG RHKGYKREIY VDVPGEVDRR IPFGQLRRFA WRELQLATDN FSEKNVLGQG GFGKVYKGVL
301: SDSTKVAVKR LTDYESPGGD AAFQREVEMI SVAVHRNLLR LIGFCTTPTE RLLVYPYMQN LSVAYRLREL KPGESVLIWP TRKRVALGTA RGLEYLHEHC
401: NPKIIHRDVK AANVLLDEDF EAVVGDFGLA KLVDVRKTNV TTQVRGTMGH IAPEYLSTGK SSEKTDVFGY GITLLEIVTG QRAIDFSRLE EEDDVLLLDH
501: VKKLQREKRL DAIVDRNLHK NYNMDEVEMM IQVALLCTQG SPEDRPAMSE VVRMLEGEGL AERWEEWQHV EVTRRQEYER LQRRFDWGED SIYNQDAVEL
601: SGGR

Best Arabidopsis Sequence Match ( AT5G10290.2 )
(BLAST)

001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.