Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 5
- vacuole 4
- plasma membrane 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61461 | Canola | golgi, plasma membrane | 91.93 | 91.5 |
| Bra031479.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 78.64 | 91.36 |
| CDY46185 | Canola | golgi, plasma membrane | 91.93 | 91.35 |
| CDY61508 | Canola | cytosol | 71.52 | 89.15 |
| CDY44608 | Canola | cytosol | 71.36 | 88.95 |
| KRH74566 | Soybean | plasma membrane | 75.79 | 76.89 |
| KRH69595 | Soybean | plasma membrane | 75.79 | 76.76 |
| PGSC0003DMT400019924 | Potato | cytosol | 72.78 | 75.78 |
| VIT_01s0127g00230.t01 | Wine grape | plasma membrane | 74.53 | 75.24 |
| Solyc04g039730.2.1 | Tomato | plasma membrane | 72.15 | 73.19 |
| HORVU6Hr1G074570.6 | Barley | cytosol | 40.51 | 71.11 |
| PGSC0003DMT400035086 | Potato | plasma membrane | 67.41 | 71.0 |
| Solyc05g005140.2.1 | Tomato | plasma membrane | 67.56 | 70.81 |
| GSMUA_Achr2P23200_001 | Banana | plasma membrane | 70.89 | 70.66 |
| HORVU4Hr1G029640.2 | Barley | cytosol | 27.53 | 69.88 |
| GSMUA_Achr6P08840_001 | Banana | plasma membrane | 67.09 | 69.85 |
| Os01t0171000-01 | Rice | plasma membrane | 67.56 | 67.99 |
| EES02381 | Sorghum | golgi, plasma membrane, vacuole | 68.2 | 67.98 |
| TraesCS3B01G106100.1 | Wheat | plasma membrane | 67.56 | 67.56 |
| TraesCS3D01G091000.2 | Wheat | plasma membrane | 67.72 | 67.51 |
| HORVU3Hr1G016240.5 | Barley | plasma membrane | 67.41 | 67.19 |
| Zm00001d008724_P007 | Maize | plasma membrane | 66.61 | 66.83 |
| Zm00001d039678_P002 | Maize | plasma membrane | 67.56 | 64.5 |
| HORVU7Hr1G083870.7 | Barley | cytosol | 20.25 | 62.44 |
| HORVU6Hr1G093140.1 | Barley | mitochondrion, plastid | 26.74 | 61.9 |
| TraesCS3A01G091100.1 | Wheat | plasma membrane | 60.13 | 59.01 |
| AT5G16000.1 | Thale cress | plasma membrane | 59.02 | 58.46 |
| AT3G25560.3 | Thale cress | plasma membrane | 59.65 | 58.27 |
| AT2G23950.1 | Thale cress | plasma membrane | 56.33 | 56.15 |
| AT5G45780.1 | Thale cress | plasma membrane | 52.37 | 53.91 |
| AT4G30520.1 | Thale cress | plasma membrane | 55.06 | 53.7 |
| AT1G71830.1 | Thale cress | plasma membrane | 52.06 | 52.64 |
| AT1G34210.1 | Thale cress | plasma membrane | 51.11 | 51.43 |
| AT2G13790.1 | Thale cress | plasma membrane | 49.37 | 50.32 |
| AT2G13800.3 | Thale cress | plasma membrane | 47.78 | 50.25 |
| AT4G33430.2 | Thale cress | plasma membrane | 50.0 | 47.73 |
| AT5G10290.1 | Thale cress | plasma membrane | 45.09 | 46.49 |
| AT5G65240.2 | Thale cress | plasma membrane | 44.78 | 44.22 |
| AT5G63710.3 | Thale cress | plasma membrane | 42.25 | 43.41 |
| AT1G78530.1 | Thale cress | plasma membrane, vacuole | 19.46 | 34.65 |
| AT5G62710.1 | Thale cress | plasma membrane | 32.12 | 33.61 |
| AT2G35620.3 | Thale cress | plasma membrane | 30.54 | 32.77 |
| AT1G31420.3 | Thale cress | plasma membrane | 30.54 | 32.6 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:842374 | ProteinID:AAB71968.1 |
| ProteinID:AEE33734.1 | ArrayExpress:AT1G60800 | EnsemblPlantsGene:AT1G60800 | RefSeq:AT1G60800 | TAIR:AT1G60800 | RefSeq:AT1G60800-TAIR-G |
| EnsemblPlants:AT1G60800.1 | TAIR:AT1G60800.1 | EMBL:AY056294 | EMBL:AY150495 | EMBL:FJ708666 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0004675 | GO:GO:0004871 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007166 | GO:GO:0007178 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016032 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0038023 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | Symbol:NIK3 | RefSeq:NP_176279.1 | PFAM:PF00069 | PFAM:PF08263 |
| PFAM:PF13855 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF49 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q93ZS4 | SMART:SM00220 | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
| InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00000483C4 | SEG:seg | : |
Description
NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
Coordinates
chr1:-:22383393..22387766
Molecular Weight (calculated)
70174.9 Da
IEP (calculated)
6.914
GRAVY (calculated)
-0.200
Length
632 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.