Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plasma membrane 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024069.1-P | Field mustard | plasma membrane | 90.28 | 91.98 |
| CDY39211 | Canola | plasma membrane | 81.94 | 91.71 |
| CDX72249 | Canola | plasma membrane | 90.12 | 91.68 |
| AT2G23950.1 | Thale cress | plasma membrane | 82.41 | 84.23 |
| CDX68670 | Canola | plasma membrane | 77.93 | 84.17 |
| CDY28194 | Canola | cytosol | 37.96 | 79.87 |
| VIT_11s0037g00960.t01 | Wine grape | plasma membrane | 72.99 | 73.91 |
| KRH72362 | Soybean | plasma membrane | 71.14 | 72.26 |
| KRH02989 | Soybean | plasma membrane | 71.6 | 72.05 |
| PGSC0003DMT400028991 | Potato | plasma membrane | 68.21 | 70.05 |
| Solyc07g006110.2.1 | Tomato | plasma membrane | 68.06 | 69.89 |
| GSMUA_Achr9P13420_001 | Banana | golgi, plasma membrane, vacuole | 62.96 | 63.26 |
| Bra011200.1-P | Field mustard | plastid | 52.01 | 62.87 |
| GSMUA_Achr3P04810_001 | Banana | plasma membrane | 61.11 | 61.3 |
| AT5G16000.1 | Thale cress | plasma membrane | 59.57 | 60.5 |
| TraesCS7D01G416400.1 | Wheat | plasma membrane | 60.19 | 60.19 |
| TraesCS7A01G425500.1 | Wheat | plasma membrane | 60.65 | 60.18 |
| TraesCS7B01G324500.1 | Wheat | plasma membrane | 59.88 | 60.06 |
| Os08t0442700-01 | Rice | plasma membrane | 62.35 | 59.59 |
| AT3G25560.3 | Thale cress | plasma membrane | 58.33 | 58.42 |
| AT1G60800.1 | Thale cress | plasma membrane | 53.7 | 55.06 |
| HORVU7Hr1G097930.4 | Barley | plasma membrane, plastid | 59.72 | 54.58 |
| KXG25244 | Sorghum | plastid | 61.27 | 53.87 |
| AT1G71830.1 | Thale cress | plasma membrane | 47.84 | 49.6 |
| AT1G34210.1 | Thale cress | plasma membrane | 47.53 | 49.04 |
| AT5G45780.1 | Thale cress | plasma membrane | 46.14 | 48.7 |
| Zm00001d032142_P004 | Maize | plasma membrane | 61.57 | 47.9 |
| AT2G13790.1 | Thale cress | plasma membrane | 45.06 | 47.1 |
| AT2G13800.3 | Thale cress | plasma membrane | 43.21 | 46.59 |
| AT5G10290.1 | Thale cress | plasma membrane | 42.9 | 45.35 |
| AT4G33430.2 | Thale cress | plasma membrane | 45.22 | 44.26 |
| AT5G65240.2 | Thale cress | plasma membrane | 42.75 | 43.28 |
| AT5G63710.3 | Thale cress | plasma membrane | 38.73 | 40.81 |
| AT1G78530.1 | Thale cress | plasma membrane, vacuole | 20.22 | 36.9 |
| AT1G31420.3 | Thale cress | plasma membrane | 30.4 | 33.28 |
| AT2G35620.3 | Thale cress | plasma membrane | 29.78 | 32.77 |
| AT5G62710.1 | Thale cress | plasma membrane | 28.7 | 30.79 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:829175 | UniProt:A0A178UW81 |
| ProteinID:AEE85776.1 | ArrayExpress:AT4G30520 | EnsemblPlantsGene:AT4G30520 | RefSeq:AT4G30520 | TAIR:AT4G30520 | RefSeq:AT4G30520-TAIR-G |
| EnsemblPlants:AT4G30520.1 | TAIR:AT4G30520.1 | EMBL:AY070043 | EMBL:AY096538 | Unigene:At.28424 | ProteinID:CAB79770.1 |
| EMBL:FJ708760 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0004675 | GO:GO:0004713 | GO:GO:0004871 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007166 | GO:GO:0007178 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0018108 | GO:GO:0019538 | GO:GO:0038023 | InterPro:IPR000719 | InterPro:IPR001611 |
| InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | RefSeq:NP_194781.2 |
| ProteinID:OAO97607.1 | PFAM:PF00069 | PFAM:PF08263 | PFAM:PF13855 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00019 | ScanProsite:PS00107 | ScanProsite:PS00108 |
| PFscan:PS50011 | PFscan:PS51450 | PANTHER:PTHR27001 | PANTHER:PTHR27001:SF144 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| UniProt:Q8VYT3 | SMART:SM00220 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00000A6F71 | SEG:seg | : | : | : |
Description
Probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYT3]
Coordinates
chr4:-:14907942..14911446
Molecular Weight (calculated)
71197.6 Da
IEP (calculated)
7.285
GRAVY (calculated)
-0.090
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVVTKKTMK IQIHLLYSFL FLCFSTLTLS SEPRNPEVEA LISIRNNLHD PHGALNNWDE FSVDPCSWAM ITCSPDNLVI GLGAPSQSLS GGLSESIGNL
101: TNLRQVSLQN NNISGKIPPE LGFLPKLQTL DLSNNRFSGD IPVSIDQLSS LQYLRLNNNS LSGPFPASLS QIPHLSFLDL SYNNLSGPVP KFPARTFNVA
201: GNPLICRSNP PEICSGSINA SPLSVSLSSS SGRRSNRLAI ALSVSLGSVV ILVLALGSFC WYRKKQRRLL ILNLNDKQEE GLQGLGNLRS FTFRELHVYT
301: DGFSSKNILG AGGFGNVYRG KLGDGTMVAV KRLKDINGTS GDSQFRMELE MISLAVHKNL LRLIGYCATS GERLLVYPYM PNGSVASKLK SKPALDWNMR
401: KRIAIGAARG LLYLHEQCDP KIIHRDVKAA NILLDECFEA VVGDFGLAKL LNHADSHVTT AVRGTVGHIA PEYLSTGQSS EKTDVFGFGI LLLELITGLR
501: ALEFGKTVSQ KGAMLEWVRK LHEEMKVEEL LDRELGTNYD KIEVGEMLQV ALLCTQYLPA HRPKMSEVVL MLEGDGLAER WAASHNHSHF YHANISFKTI
601: SSLSTTSVSR LDAHCNDPTY QMFGSSAFDD DDDHQPLDSF AMELSGPR
101: TNLRQVSLQN NNISGKIPPE LGFLPKLQTL DLSNNRFSGD IPVSIDQLSS LQYLRLNNNS LSGPFPASLS QIPHLSFLDL SYNNLSGPVP KFPARTFNVA
201: GNPLICRSNP PEICSGSINA SPLSVSLSSS SGRRSNRLAI ALSVSLGSVV ILVLALGSFC WYRKKQRRLL ILNLNDKQEE GLQGLGNLRS FTFRELHVYT
301: DGFSSKNILG AGGFGNVYRG KLGDGTMVAV KRLKDINGTS GDSQFRMELE MISLAVHKNL LRLIGYCATS GERLLVYPYM PNGSVASKLK SKPALDWNMR
401: KRIAIGAARG LLYLHEQCDP KIIHRDVKAA NILLDECFEA VVGDFGLAKL LNHADSHVTT AVRGTVGHIA PEYLSTGQSS EKTDVFGFGI LLLELITGLR
501: ALEFGKTVSQ KGAMLEWVRK LHEEMKVEEL LDRELGTNYD KIEVGEMLQV ALLCTQYLPA HRPKMSEVVL MLEGDGLAER WAASHNHSHF YHANISFKTI
601: SSLSTTSVSR LDAHCNDPTY QMFGSSAFDD DDDHQPLDSF AMELSGPR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.