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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • endoplasmic reticulum 5
  • golgi 6
  • extracellular 5
  • vacuole 4
  • plasma membrane 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39685 Canola plasma membrane 89.91 89.48
Bra032133.1-P Field mustard plasma membrane 89.91 89.48
CDY65182 Canola plasma membrane 89.59 89.17
AT4G30520.1 Thale cress plasma membrane 84.23 82.41
VIT_11s0037g00960.t01 Wine grape plasma membrane 72.56 71.88
KRH72362 Soybean plasma membrane 71.61 71.16
KRH02989 Soybean plasma membrane 71.92 70.81
Solyc07g006110.2.1 Tomato plasma membrane 67.51 67.83
PGSC0003DMT400028991 Potato plasma membrane 67.51 67.83
GSMUA_Achr9P13420_001 Banana golgi, plasma membrane, vacuole 62.93 61.86
AT5G16000.1 Thale cress plasma membrane 61.2 60.81
GSMUA_Achr3P04810_001 Banana plasma membrane 61.04 59.91
TraesCS7D01G416400.1 Wheat plasma membrane 61.04 59.72
TraesCS7B01G324500.1 Wheat plasma membrane 60.57 59.44
TraesCS7A01G425500.1 Wheat plasma membrane 61.2 59.42
Os08t0442700-01 Rice plasma membrane 62.93 58.85
AT3G25560.3 Thale cress plasma membrane 59.15 57.96
AT1G60800.1 Thale cress plasma membrane 56.15 56.33
HORVU7Hr1G097930.4 Barley plasma membrane, plastid 60.57 54.16
KXG25244 Sorghum plastid 61.83 53.19
AT5G45780.1 Thale cress plasma membrane 47.48 49.02
AT1G71830.1 Thale cress plasma membrane 47.79 48.48
Zm00001d032142_P004 Maize plasma membrane 62.3 47.42
AT1G34210.1 Thale cress plasma membrane 46.85 47.29
AT2G13790.1 Thale cress plasma membrane 44.95 45.97
AT2G13800.3 Thale cress plasma membrane 43.06 45.42
AT4G33430.2 Thale cress plasma membrane 46.06 44.11
AT5G10290.1 Thale cress plasma membrane 42.59 44.05
AT5G65240.2 Thale cress plasma membrane 42.74 42.34
AT5G63710.3 Thale cress plasma membrane 39.75 40.98
AT1G78530.1 Thale cress plasma membrane, vacuole 20.19 36.06
AT1G31420.3 Thale cress plasma membrane 29.81 31.93
AT2G35620.3 Thale cress plasma membrane 29.34 31.58
AT5G62710.1 Thale cress plasma membrane 29.97 31.46
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:816928UniProt:A0A178VWX8
ProteinID:AAC63680.1ProteinID:AEC07507.1EMBL:AK220652EMBL:AK226719ArrayExpress:AT2G23950EnsemblPlantsGene:AT2G23950
RefSeq:AT2G23950TAIR:AT2G23950RefSeq:AT2G23950-TAIR-GEnsemblPlants:AT2G23950.1TAIR:AT2G23950.1Unigene:At.39223
EMBL:FJ708698GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0004675GO:GO:0004871GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0007166GO:GO:0007178GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0038023
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptRefSeq:NP_179973.2ProteinID:OAP09901.1PFAM:PF00069PFAM:PF08263PFAM:PF13855
PO:PO:0000293PO:PO:0007611PO:PO:0009046PO:PO:0020100PRINTS:PR00019ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PFscan:PS51450PANTHER:PTHR27001PANTHER:PTHR27001:SF144InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSUniProt:Q0WVM4SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000034ED78SEG:seg::
Description
Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVM4]
Coordinates
chr2:-:10186891..10190492
Molecular Weight (calculated)
69697.9 Da
IEP (calculated)
8.122
GRAVY (calculated)
-0.091
Length
634 amino acids
Sequence
(BLAST)
001: MVVMKLITMK IFSVLLLLCF FVTCSLSSEP RNPEVEALIN IKNELHDPHG VFKNWDEFSV DPCSWTMISC SSDNLVIGLG APSQSLSGTL SGSIGNLTNL
101: RQVSLQNNNI SGKIPPEICS LPKLQTLDLS NNRFSGEIPG SVNQLSNLQY LRLNNNSLSG PFPASLSQIP HLSFLDLSYN NLRGPVPKFP ARTFNVAGNP
201: LICKNSLPEI CSGSISASPL SVSLRSSSGR RTNILAVALG VSLGFAVSVI LSLGFIWYRK KQRRLTMLRI SDKQEEGLLG LGNLRSFTFR ELHVATDGFS
301: SKSILGAGGF GNVYRGKFGD GTVVAVKRLK DVNGTSGNSQ FRTELEMISL AVHRNLLRLI GYCASSSERL LVYPYMSNGS VASRLKAKPA LDWNTRKKIA
401: IGAARGLFYL HEQCDPKIIH RDVKAANILL DEYFEAVVGD FGLAKLLNHE DSHVTTAVRG TVGHIAPEYL STGQSSEKTD VFGFGILLLE LITGMRALEF
501: GKSVSQKGAM LEWVRKLHKE MKVEELVDRE LGTTYDRIEV GEMLQVALLC TQFLPAHRPK MSEVVQMLEG DGLAERWAAS HDHSHFYHAN MSYRTITSTD
601: GNNQTKHLFG SSGFEDEDDN QALDSFAMEL SGPR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.