Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52435 | Canola | plasma membrane, vacuole | 90.42 | 91.45 |
| Bra035044.1-P | Field mustard | plasma membrane, vacuole | 89.58 | 90.6 |
| CDX88452 | Canola | plasma membrane, vacuole | 89.3 | 90.31 |
| KRH13485 | Soybean | golgi, plasma membrane | 70.99 | 71.39 |
| Solyc07g062040.2.1 | Tomato | plastid | 61.69 | 69.75 |
| VIT_19s0014g00110.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 69.3 | 69.49 |
| PGSC0003DMT400018244 | Potato | plasma membrane | 67.04 | 67.81 |
| GSMUA_Achr10P... | Banana | golgi, vacuole | 65.92 | 66.67 |
| HORVU3Hr1G033790.1 | Barley | golgi, plasma membrane | 59.15 | 60.34 |
| Os01t0247500-01 | Rice | golgi, plasma membrane | 59.44 | 60.29 |
| TraesCS3B01G199100.1 | Wheat | golgi, plasma membrane | 58.87 | 60.06 |
| TraesCS3A01G167100.1 | Wheat | golgi, plasma membrane | 58.87 | 60.06 |
| TraesCS3D01G173200.1 | Wheat | golgi, plasma membrane | 58.87 | 60.06 |
| EES02154 | Sorghum | golgi, plasma membrane | 60.0 | 58.52 |
| Zm00001d039243_P001 | Maize | golgi, plasma membrane | 57.75 | 54.38 |
| GSMUA_Achr5P16740_001 | Banana | golgi, mitochondrion, plasma membrane, plastid | 64.79 | 53.86 |
| AT1G31420.3 | Thale cress | plasma membrane | 43.66 | 26.18 |
| AT2G35620.3 | Thale cress | plasma membrane | 42.82 | 25.81 |
| AT5G62710.1 | Thale cress | plasma membrane | 42.82 | 25.17 |
| AT5G10290.1 | Thale cress | plasma membrane | 36.06 | 20.88 |
| AT1G71830.1 | Thale cress | plasma membrane | 36.62 | 20.8 |
| AT2G13800.3 | Thale cress | plasma membrane | 34.93 | 20.63 |
| AT1G34210.1 | Thale cress | plasma membrane | 36.06 | 20.38 |
| AT2G13790.1 | Thale cress | plasma membrane | 35.49 | 20.32 |
| AT4G30520.1 | Thale cress | plasma membrane | 36.9 | 20.22 |
| AT5G45780.1 | Thale cress | plasma membrane | 34.93 | 20.2 |
| AT2G23950.1 | Thale cress | plasma membrane | 36.06 | 20.19 |
| AT4G33430.2 | Thale cress | plasma membrane | 36.9 | 19.79 |
| AT5G16000.1 | Thale cress | plasma membrane | 35.49 | 19.75 |
| AT3G25560.3 | Thale cress | plasma membrane | 35.77 | 19.63 |
| AT1G60800.1 | Thale cress | plasma membrane | 34.65 | 19.46 |
| AT5G65240.2 | Thale cress | plasma membrane | 34.93 | 19.38 |
| AT5G63710.3 | Thale cress | plasma membrane | 33.52 | 19.35 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.13.1 | Gene3D:3.30.200.20 | EntrezGene:844189 | UniProt:A0A178WFX3 | ProteinID:AAD30583.1 |
| ProteinID:AEE36117.1 | EMBL:AK226294 | ProteinID:ANM58448.1 | ArrayExpress:AT1G78530 | EnsemblPlantsGene:AT1G78530 | RefSeq:AT1G78530 |
| TAIR:AT1G78530 | RefSeq:AT1G78530-TAIR-G | EnsemblPlants:AT1G78530.1 | TAIR:AT1G78530.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | RefSeq:NP_001320881.1 | RefSeq:NP_177974.1 | ProteinID:OAP17256.1 |
| ProteinID:OAP17257.1 | PFAM:PF00069 | PIRSF:PIRSF000654 | PO:PO:0000293 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0020038 | PO:PO:0025022 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR44831 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q9SYM9 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS |
| TMHMM:TMhelix | UniParc:UPI00000484B2 | : | : | : | : |
Description
Receptor-like serine/threonine-protein kinase At1g78530 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM9]
Coordinates
chr1:-:29539086..29540865
Molecular Weight (calculated)
40228.7 Da
IEP (calculated)
9.127
GRAVY (calculated)
-0.168
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MANAKETTFY ITISVVAFVI GKIVIALLFY KRWKRKHTIH ENGFPVKGGG KMVMFRSQLL NSVSSDMFMK KTHKLSNKDI LGSGGFGTVY RLVIDDSTTF
101: AVKRLNRGTS ERDRGFHREL EAMADIKHRN IVTLHGYFTS PHYNLLIYEL MPNGSLDSFL HGRKALDWAS RYRIAVGAAR GISYLHHDCI PHIIHRDIKS
201: SNILLDHNME ARVSDFGLAT LMEPDKTHVS TFVAGTFGYL APEYFDTGKA TMKGDVYSFG VVLLELLTGR KPTDDEFFEE GTKLVTWVKG VVRDQREEVV
301: IDNRLRGSSV QENEEMNDVF GIAMMCLEPE PAIRPAMTEV VKLLEYIKLS TRSSF
101: AVKRLNRGTS ERDRGFHREL EAMADIKHRN IVTLHGYFTS PHYNLLIYEL MPNGSLDSFL HGRKALDWAS RYRIAVGAAR GISYLHHDCI PHIIHRDIKS
201: SNILLDHNME ARVSDFGLAT LMEPDKTHVS TFVAGTFGYL APEYFDTGKA TMKGDVYSFG VVLLELLTGR KPTDDEFFEE GTKLVTWVKG VVRDQREEVV
301: IDNRLRGSSV QENEEMNDVF GIAMMCLEPE PAIRPAMTEV VKLLEYIKLS TRSSF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.