Factsheet for TraesCS3A01G490100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G203400.1
TraesCS1A01G421400.1
TraesCS1B01G217500.1
TraesCS1D01G206900.1
TraesCS2A01G343100.1
TraesCS2A01G582500.1
TraesCS2B01G044200.1
TraesCS2B01G340700.1
TraesCS2B01G604300.1
TraesCS2D01G321400.1
TraesCS2D01G597600.1
TraesCS3A01G245000.1
TraesCS3A01G490100.1
TraesCS3B01G275000.1
TraesCS3B01G550900.1
TraesCS3B01G551200.1
TraesCS3D01G246500.1
TraesCS3D01G496100.1
TraesCS4A01G104800.1
TraesCS4B01G199200.1
TraesCS4B01G328200.1
TraesCS4D01G200200.1
TraesCS4D01G325200.1
TraesCS5A01G177300.1	plasma membrane
TraesCS5A01G500000.1
TraesCS5B01G174400.1	plasma membrane
TraesCS5D01G181500.1	plasma membrane
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7A01G328100.2
TraesCS7B01G182300.1
TraesCS7B01G228900.2
TraesCS7D01G291200.3
TraesCS7D01G324900.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G39400.1	TraesCS2A01G343100.1	AT1G71830.1	16473966
AT4G39400.1	TraesCS2B01G340700.1	AT1G71830.1	16473966
AT4G39400.1	TraesCS2D01G321400.1	AT1G71830.1	16473966
AT4G39400.1	TraesCS6A01G203600.2	AT1G71830.1	16473966
AT4G39400.1	TraesCS6B01G223700.3	AT1G71830.1	16473966
AT4G39400.1	TraesCS6D01G186900.2	AT1G71830.1	16473966
AT4G39400.1	TraesCS7A01G293300.3	AT1G71830.1	16473966
AT4G39400.1	TraesCS7B01G182300.1	AT1G71830.1	16473966
AT4G39400.1	TraesCS7D01G291200.3	AT1G71830.1	16473966
AT4G39400.1	TraesCS5A01G177300.1	AT3G13380.1	24064770
AT4G39400.1	TraesCS5B01G174400.1	AT3G13380.1	24064770
AT4G39400.1	TraesCS5D01G181500.1	AT3G13380.1	24064770
AT4G39400.1	TraesCS2A01G582500.1	AT4G00710.1	18653891
AT4G39400.1	TraesCS2B01G604300.1	AT4G00710.1	18653891
AT4G39400.1	TraesCS2D01G597600.1	AT4G00710.1	18653891
AT4G39400.1	TraesCS7A01G328100.2	AT4G00710.1	18653891
AT4G39400.1	TraesCS7B01G228900.2	AT4G00710.1	18653891
AT4G39400.1	TraesCS7D01G324900.2	AT4G00710.1	18653891
AT4G39400.1	TraesCS1A01G203400.1	AT4G35230.1	18653891
AT4G39400.1	TraesCS1B01G217500.1	AT4G35230.1	18653891
AT4G39400.1	TraesCS1D01G206900.1	AT4G35230.1	18653891
AT4G39400.1	TraesCS4B01G328200.1	AT4G35230.1	18653891
AT4G39400.1	TraesCS4D01G325200.1	AT4G35230.1	18653891
AT4G39400.1	TraesCS5A01G500000.1	AT4G35230.1	18653891
AT4G39400.1	TraesCS3A01G245000.1	AT4G39400.1	15935775
AT4G39400.1	TraesCS3A01G490100.1	AT4G39400.1	15935775
AT4G39400.1	TraesCS3B01G275000.1	AT4G39400.1	15935775
AT4G39400.1	TraesCS3B01G550900.1	AT4G39400.1	15935775
AT4G39400.1	TraesCS3B01G551200.1	AT4G39400.1	15935775
AT4G39400.1	TraesCS3D01G246500.1	AT4G39400.1	15935775
AT4G39400.1	TraesCS3D01G496100.1	AT4G39400.1	15935775
AT4G39400.1	TraesCS3A01G245000.1	AT4G39400.1	16473966
AT4G39400.1	TraesCS3A01G490100.1	AT4G39400.1	16473966
AT4G39400.1	TraesCS3B01G275000.1	AT4G39400.1	16473966
AT4G39400.1	TraesCS3B01G550900.1	AT4G39400.1	16473966
AT4G39400.1	TraesCS3B01G551200.1	AT4G39400.1	16473966
AT4G39400.1	TraesCS3D01G246500.1	AT4G39400.1	16473966
AT4G39400.1	TraesCS3D01G496100.1	AT4G39400.1	16473966
AT4G39400.1	TraesCS1A01G421400.1	AT5G58220.1	15319482
AT4G39400.1	TraesCS2B01G044200.1	AT5G58220.1	15319482
AT4G39400.1	TraesCS4A01G104800.1	AT5G58220.1	15319482
AT4G39400.1	TraesCS4B01G199200.1	AT5G58220.1	15319482
AT4G39400.1	TraesCS4D01G200200.1	AT5G58220.1	15319482

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G550900.1	Wheat	plasma membrane	91.4	75.53
TraesCS3D01G496100.1	Wheat	plasma membrane	90.17	74.58
TraesCS3A01G245000.1	Wheat	plasma membrane	48.38	38.56
GSMUA_Achr6P35950_001	Banana	plasma membrane	34.75	34.63
OQU86764	Sorghum	plasma membrane	37.32	33.64
CDY66903	Canola	extracellular	15.42	33.09
GSMUA_AchrUn_...	Banana	plasma membrane	28.04	31.22
GSMUA_Achr4P08920_001	Banana	plasma membrane, vacuole	30.5	30.92
GSMUA_Achr1P05250_001	Banana	golgi, plasma membrane	27.6	30.09
CDY41977	Canola	plasma membrane	36.54	29.04
CDY12143	Canola	plasma membrane	34.19	28.6
KRH64131	Soybean	plasma membrane	37.77	28.48
VIT_07s0031g01850.t01	Wine grape	plasma membrane	38.32	28.46
Solyc04g051510.1.1	Tomato	golgi, plasma membrane, vacuole	38.32	28.42
KRH53813	Soybean	plasma membrane	37.54	28.38
PGSC0003DMT400050728	Potato	golgi, plasma membrane, vacuole	38.21	28.36
CDX72702	Canola	plasma membrane	35.75	28.34
Bra010684.1-P	Field mustard	plasma membrane	37.09	28.28
AT4G39400.1	Thale cress	plasma membrane, vacuole	37.65	28.18
CDY53185	Canola	plasma membrane	33.74	28.12
Bra011862.1-P	Field mustard	plasma membrane	37.43	28.06
Bra033615.1-P	Field mustard	plasma membrane	37.32	27.97
CDX90332	Canola	plasma membrane	34.08	27.58
TraesCS3A01G099400.1	Wheat	plasma membrane	31.4	24.14
TraesCS5A01G177300.1	Wheat	plasma membrane	32.29	23.86
CDY66904	Canola	cytosol, peroxisome, plasma membrane	12.07	22.74
TraesCS2A01G182400.1	Wheat	plasma membrane	25.47	20.54
TraesCS6A01G166200.1	Wheat	plasma membrane	24.36	18.35
TraesCS3A01G423400.1	Wheat	plasma membrane	26.7	18.23

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.1490.310	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF13516	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR43887	PANTHER:PTHR43887:SF15	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52047	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G490100	EnsemblPlants:TraesCS3A01G490100.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr3A:-:717851062..717854699

Molecular Weight (calculated)

96816.0 Da

IEP (calculated)

7.474

GRAVY (calculated)

0.002

Length

895 amino acids

Sequence
(BLAST)

001: MGTALCLALA VLLLLLANDP VLVAADDGVD EQLLERFKAA VRNRGELGGW TRGDGACSFP GAACVRGGKR LVSLSLSGVP LDVDFRAVAG TLLQLGGVEV
101: VSLRGANMSG SLASGGVAVV WRCGQKLAQL DLSGNRALRG SVADARVLAG ACDGLRELNL SGNALVGGGG GKGDGGDIFA RLDVLDLSDN NITGDGDLSW
201: MGGVRRLNLA WNSISGPLQV PAFTNCSRME SLDLSGNLIS GEVLPGALSG CTALVSLNLS SNHLKGAFPP DTRCLRRSPR LSWLTLSLNH FHGSMPDSLG
301: RLANLRMLDF SSNELSGAIP SSLCPNTGSK LVQARDLSLN YINGSIPTSV GSLARLRDLI LWENKLEGEI PVSLGGARGL EHLILEYNTL TGSIPSELMN
401: CKNLKWIALG SNRLSGSVPA WLGRLDNLAI LKLNNNSFSG PKRIDTTGAG EAVREGGYRL HDSAATYIYL RNDEQSSKCR GAGSLLEIGG VRLEQLNQMA
501: SKNTCNFTRV YILDSGEHTL KSNASMIFLD LSFNKLDSEI PKELGKMNYV AIMNLRQNRL SGAIPAELAV DNGKTKSSND LTAPASHQLV SHLELVRATG
601: NFSEDYMLGY GGHGKVFKGQ LSDGLMVAIK VFDMRSTCAI RSFEAKCHVL RMAWHRNLIR IITTCSNMNF RALVLQYMPN GNLETLLHCS QQGETQFGFR
701: ERLCVMLEVS MAMEYLHHGY HEIVLHCDLK PSNVLFDEDM MAHVADFGIA RLLQADGNSA FSINMHDTIG YMSPEYGSYG KASRKSDVFS YGIMLLEVFT
801: GKRPTDAMFV GEPSLRRWVN QLFQAGQLVH VMDRRLLQCF GMDISFLVPI LEVGLLCSSD SPGDRITMSE VVLKMKNVKT EYIKYISSTL GNVSQ

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.