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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:
  • mitochondrion 3
  • peroxisome 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G421400.1
TraesCS2B01G044200.1
TraesCS3A01G245000.1
TraesCS3A01G490100.1
TraesCS3B01G275000.1
TraesCS3B01G550900.1
TraesCS3B01G551200.1
TraesCS3D01G246500.1
TraesCS3D01G496100.1
TraesCS4A01G104800.1
TraesCS4B01G199200.1
TraesCS4D01G200200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G58220.1 TraesCS3A01G245000.1 AT4G39400.1 15319482
AT5G58220.1 TraesCS3A01G490100.1 AT4G39400.1 15319482
AT5G58220.1 TraesCS3B01G275000.1 AT4G39400.1 15319482
AT5G58220.1 TraesCS3B01G550900.1 AT4G39400.1 15319482
AT5G58220.1 TraesCS3B01G551200.1 AT4G39400.1 15319482
AT5G58220.1 TraesCS3D01G246500.1 AT4G39400.1 15319482
AT5G58220.1 TraesCS3D01G496100.1 AT4G39400.1 15319482
AT5G58220.1 TraesCS1A01G421400.1 AT5G58220.1 21798944
AT5G58220.1 TraesCS2B01G044200.1 AT5G58220.1 21798944
AT5G58220.1 TraesCS4A01G104800.1 AT5G58220.1 21798944
AT5G58220.1 TraesCS4B01G199200.1 AT5G58220.1 21798944
AT5G58220.1 TraesCS4D01G200200.1 AT5G58220.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4B01G199200.1 Wheat cytosol, mitochondrion, peroxisome, plastid 97.59 97.59
TraesCS4A01G104800.1 Wheat cytosol, mitochondrion, peroxisome, plastid 96.08 96.08
HORVU4Hr1G057650.8 Barley cytosol, mitochondrion, peroxisome, plastid 93.37 93.37
OQU92482 Sorghum cytosol 83.73 83.73
Os03t0390700-01 Rice plasma membrane 84.04 83.53
Zm00001d047217_P001 Maize cytosol 75.6 73.39
GSMUA_Achr5P13910_001 Banana peroxisome 63.55 63.55
VIT_09s0018g01180.t01 Wine grape cytosol, nucleus, peroxisome 61.14 61.52
Solyc01g080940.2.1 Tomato cytoskeleton, cytosol, peroxisome 58.13 57.61
Bra020380.1-P Field mustard cytosol, nucleus, peroxisome 55.12 57.19
CDY02804 Canola cytosol 54.52 57.1
PGSC0003DMT400004592 Potato cytoskeleton, cytosol, peroxisome 57.53 57.01
KRH66244 Soybean cytosol, nucleus, peroxisome 56.63 56.63
KRH07309 Soybean cytosol, nucleus, peroxisome 56.63 56.63
CDY32716 Canola cytosol 54.52 56.56
AT5G58220.1 Thale cress cytosol 50.9 52.16
GSMUA_Achr5P13880_001 Banana cytosol 27.71 51.69
Protein Annotations
KEGG:00230+3.5.2.17KEGG:00230+4.1.1.97Gene3D:1.10.3330.10Gene3D:2.60.40.180MapMan:6.1.4.7GO:GO:0001560
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005777GO:GO:0005829GO:GO:0005886GO:GO:0006139GO:GO:0006144GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009605GO:GO:0009719
GO:GO:0009742GO:GO:0009987GO:GO:0009991GO:GO:0016020GO:GO:0016043GO:GO:0016049
GO:GO:0016787GO:GO:0019428GO:GO:0031234GO:GO:0033971GO:GO:0040007GO:GO:0051289
GO:GO:0051997InterPro:Hydroxyisourate_hydrolaseInterPro:IPR036778InterPro:IPR036817InterPro:OHCU_decarboxylaseInterPro:OHCU_decarboxylase_sf
PFAM:PF00576PFAM:PF09349PRINTS:PR00189ScanProsite:PS00768PANTHER:PTHR10395PANTHER:PTHR10395:SF7
SUPFAM:SSF158694SUPFAM:SSF49472TIGRFAMs:TIGR02962InterPro:Thyroxine_BSEnsemblPlantsGene:TraesCS4D01G200200EnsemblPlants:TraesCS4D01G200200.1
InterPro:Transthyretin/HIU_hydrolaseInterPro:Transthyretin/HIU_hydrolase_dInterPro:Transthyretin/HIU_hydrolase_sfTIGR:cd05822SEG:seg:
Description
No Description!
Coordinates
chr4D:+:347232831..347236757
Molecular Weight (calculated)
36346.7 Da
IEP (calculated)
7.036
GRAVY (calculated)
-0.297
Length
332 amino acids
Sequence
(BLAST)
001: MATLRPLTVE DVLRVNGSRR FAAALAATSP FDSLTNALIA ARRIWLNEVD VTGWLEAFAA HPPIGTTSSS VSKWSKEEQS AALSTATDST AQELSEWNAK
101: YREKFGFVFM ICASGRTAPE VLAELKRRYA NRPIVELEAA AEEELKITEL RLAKLFSAET AAPPTSGENH ISQPDKAADR MRIIGAHLGA LSQHSANKAP
201: EITGSSNRTR PPITTHVLDT ALGSPAAGIE VHLEMWKDAT SPPSFDNKEF KGWTTLGTSI TNNDGRSGQL MDNVDNVAPG FYRISFNTSK YAPSGFFPYV
301: SIIFEIKRSQ TTEHFHVPLL HSPFSFTTYR GS
Best Arabidopsis Sequence Match ( AT5G58220.1 )
(BLAST)
001: MAMEIGEDEW KVCCGSSEFA KQMSTSGPLT SQEAIYTARD IWFNQVNVTD WLEAFSAHPQ IGNTPSPSIN SDFARRSVSE QSTAFATTSA SALQELAEWN
101: VLYKKKFGFI FIICASGRTH AEMLHALKER YENRPIVELE IAAMEQMKIT ELRMAKLFSD KAKVISETDS SSSPVSTKPQ DRLRIIGGHL NVAAEAKAPK
201: RSRPPITTHV LDVSRGAPAA GVEVHLEVWS GTTGPSFVHG GGGVWSSVGT SATDRDGRSG PLMDLVDALN PGTYRISFDT AKYSPGCFFP YVSIVFQVTE
301: SQKWEHFHVP LLLAPFSFST YRGS
Arabidopsis Description
TTLUric acid degradation bifunctional protein TTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.