Factsheet for Solyc01g080940.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 1
plasma membrane 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g080940.2.1
Solyc04g051510.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58220.1	Solyc04g051510.1.1	AT4G39400.1	15319482
AT5G58220.1	Solyc01g080940.2.1	AT5G58220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004592	Potato	cytoskeleton, cytosol, peroxisome	94.03	94.03
VIT_09s0018g01180.t01	Wine grape	cytosol, nucleus, peroxisome	71.94	73.03
KRH66244	Soybean	cytosol, nucleus, peroxisome	68.36	68.98
KRH07309	Soybean	cytosol, nucleus, peroxisome	68.36	68.98
CDY02804	Canola	cytosol	58.21	61.51
Bra020380.1-P	Field mustard	cytosol, nucleus, peroxisome	58.21	60.94
CDY32716	Canola	cytosol	57.91	60.62
OQU92482	Sorghum	cytosol	58.51	59.04
GSMUA_Achr5P13910_001	Banana	peroxisome	58.21	58.73
TraesCS4A01G104800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	57.91	58.43
AT5G58220.1	Thale cress	cytosol	56.42	58.33
TraesCS4D01G200200.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	57.61	58.13
Os03t0390700-01	Rice	plasma membrane	57.91	58.08
HORVU4Hr1G057650.8	Barley	cytosol, mitochondrion, peroxisome, plastid	57.31	57.83
TraesCS4B01G199200.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	57.31	57.83
TraesCS1A01G421400.1	Wheat	plastid	27.76	55.36
Zm00001d047217_P001	Maize	cytosol	55.82	54.68
GSMUA_Achr5P13880_001	Banana	cytosol	28.66	53.93
HORVU4Hr1G057640.1	Barley	cytosol	9.25	49.21
TraesCS2B01G044200.1	Wheat	mitochondrion	12.24	29.71

Protein Annotations

KEGG:00230+3.5.2.17	KEGG:00230+4.1.1.97	Gene3D:1.10.3330.10	Gene3D:2.60.40.180	MapMan:6.1.4.7	GO:GO:0001560
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0005829	GO:GO:0005886	GO:GO:0006139	GO:GO:0006144	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009719
GO:GO:0009742	GO:GO:0009987	GO:GO:0009991	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049
GO:GO:0016787	GO:GO:0019428	GO:GO:0031234	GO:GO:0033971	GO:GO:0040007	GO:GO:0051289
GO:GO:0051997	InterPro:Hydroxyisourate_hydrolase	InterPro:IPR036778	InterPro:IPR036817	UniProt:K4AXY6	InterPro:OHCU_decarboxylase
InterPro:OHCU_decarboxylase_sf	PFAM:PF00576	PFAM:PF09349	PRINTS:PR00189	ScanProsite:PS00768	PANTHER:PTHR10395
PANTHER:PTHR10395:SF7	SUPFAM:SSF158694	SUPFAM:SSF49472	EnsemblPlantsGene:Solyc01g080940.2	EnsemblPlants:Solyc01g080940.2.1	TIGRFAMs:TIGR02962
InterPro:Thyroxine_BS	InterPro:Transthyretin/HIU_hydrolase	InterPro:Transthyretin/HIU_hydrolase_d	InterPro:Transthyretin/HIU_hydrolase_sf	UniParc:UPI0002762777	SEG:seg

Description

Uric acid degradation bifunctional protein TTL [Source:Projected from Arabidopsis thaliana (AT5G58220) UniProtKB/Swiss-Prot;Acc:Q9LVM5]

Coordinates

chr1:+:80278929..80282809

Molecular Weight (calculated)

37433.5 Da

IEP (calculated)

8.449

GRAVY (calculated)

-0.316

Length

335 amino acids

Sequence
(BLAST)

001: MGSVFDEKDF LACCGSTKFA KEMVAAGPFS THQDAIHVAR NIWFNKVDVN GWLEAFAAHP QIGQNPSRDH KSPTFAQWSK GEQSTALSTA TELTLQELLE
101: WNARYREKFG FVFLICASGR STPEILAELK IRYQNRPIIE FEIAAQEQMK ITELRLSKLF SDKADTAPAI KPLSTTNIAT KAEEDRVNII GAHLTASSGA
201: ARAKPALIPN RTRPPITTHV LDTSRGYPAN GIEVRLEMWK DNQARPQFGK TYIDGWILLG SSATDKDGRS GQLMNMVEAL VPGIYRISFN TGKYNPDGFF
301: PYVSIVFEIK ESQKWDHFHV PLLLSPFSLS TYRGS

Best Arabidopsis Sequence Match ( AT5G58220.1 )
(BLAST)

001: MAMEIGEDEW KVCCGSSEFA KQMSTSGPLT SQEAIYTARD IWFNQVNVTD WLEAFSAHPQ IGNTPSPSIN SDFARRSVSE QSTAFATTSA SALQELAEWN
101: VLYKKKFGFI FIICASGRTH AEMLHALKER YENRPIVELE IAAMEQMKIT ELRMAKLFSD KAKVISETDS SSSPVSTKPQ DRLRIIGGHL NVAAEAKAPK
201: RSRPPITTHV LDVSRGAPAA GVEVHLEVWS GTTGPSFVHG GGGVWSSVGT SATDRDGRSG PLMDLVDALN PGTYRISFDT AKYSPGCFFP YVSIVFQVTE
301: SQKWEHFHVP LLLAPFSFST YRGS

Arabidopsis Description

TTLUric acid degradation bifunctional protein TTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.