Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- peroxisome 1
- plasma membrane 1
- mitochondrion 1
- cytoskeleton 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400004592 | |
| PGSC0003DMT400050728 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G58220.1 | PGSC0003DMT400050728 | AT4G39400.1 | 15319482 |
| AT5G58220.1 | PGSC0003DMT400004592 | AT5G58220.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g080940.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 94.03 | 94.03 |
| VIT_09s0018g01180.t01 | Wine grape | cytosol, nucleus, peroxisome | 69.85 | 70.91 |
| KRH07309 | Soybean | cytosol, nucleus, peroxisome | 67.76 | 68.37 |
| KRH66244 | Soybean | cytosol, nucleus, peroxisome | 66.57 | 67.17 |
| CDY02804 | Canola | cytosol | 57.61 | 60.88 |
| Bra020380.1-P | Field mustard | cytosol, nucleus, peroxisome | 57.31 | 60.0 |
| CDY32716 | Canola | cytosol | 57.01 | 59.69 |
| AT5G58220.1 | Thale cress | cytosol | 56.72 | 58.64 |
| OQU92482 | Sorghum | cytosol | 57.91 | 58.43 |
| GSMUA_Achr5P13910_001 | Banana | peroxisome | 57.91 | 58.43 |
| Os03t0390700-01 | Rice | plasma membrane | 57.61 | 57.78 |
| TraesCS4A01G104800.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 57.01 | 57.53 |
| TraesCS4D01G200200.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 57.01 | 57.53 |
| HORVU4Hr1G057650.8 | Barley | cytosol, mitochondrion, peroxisome, plastid | 56.72 | 57.23 |
| TraesCS4B01G199200.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 56.12 | 56.63 |
| TraesCS1A01G421400.1 | Wheat | plastid | 27.46 | 54.76 |
| Zm00001d047217_P001 | Maize | cytosol | 55.22 | 54.09 |
| GSMUA_Achr5P13880_001 | Banana | cytosol | 27.46 | 51.69 |
| HORVU4Hr1G057640.1 | Barley | cytosol | 9.25 | 49.21 |
| TraesCS2B01G044200.1 | Wheat | mitochondrion | 12.24 | 29.71 |
Protein Annotations
| KEGG:00230+3.5.2.17 | KEGG:00230+4.1.1.97 | Gene3D:1.10.3330.10 | EntrezGene:102602185 | Gene3D:2.60.40.180 | MapMan:6.1.4.7 |
| GO:GO:0001560 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005777 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006144 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009719 | GO:GO:0009742 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0016787 | GO:GO:0019428 | GO:GO:0031234 | GO:GO:0033971 | GO:GO:0040007 |
| GO:GO:0051289 | GO:GO:0051997 | InterPro:Hydroxyisourate_hydrolase | InterPro:IPR036778 | InterPro:IPR036817 | UniProt:M0ZNN6 |
| InterPro:OHCU_decarboxylase | InterPro:OHCU_decarboxylase_sf | PFAM:PF00576 | PFAM:PF09349 | EnsemblPlantsGene:PGSC0003DMG400001820 | PGSC:PGSC0003DMG400001820 |
| EnsemblPlants:PGSC0003DMT400004592 | PRINTS:PR00189 | ScanProsite:PS00768 | PANTHER:PTHR10395 | PANTHER:PTHR10395:SF7 | SUPFAM:SSF158694 |
| SUPFAM:SSF49472 | TIGRFAMs:TIGR02962 | InterPro:Thyroxine_BS | InterPro:Transthyretin/HIU_hydrolase | InterPro:Transthyretin/HIU_hydrolase_d | InterPro:Transthyretin/HIU_hydrolase_sf |
| UniParc:UPI000296F331 | RefSeq:XP_006354602.1 | SEG:seg | : | : | : |
Description
5-hydroxyisourate hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400001820]
Coordinates
chr1:-:67862982..67866574
Molecular Weight (calculated)
37387.4 Da
IEP (calculated)
7.611
GRAVY (calculated)
-0.309
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVFDEKDF LACCGSTKFA QQMVAVGPFS TQQDAIHAAR NIWFNKVDVN GWLEAFAAHP QIGQTPSRDH KSPAFAQWSK GEQSTALSTA TELTLQELLE
101: WNARYREKFG FVFLICASGR STPEILTELK IRYQNRPIIE FEIAAQEQMK ITELRLSRLF SDKADTAPAV KPLSTTNIAT KAEEDRVNII GAHLTAATRA
201: AGAKPAHNPI RTRPPITTHV LDTSRGCPAN GIEVRLEMWK DNQARPQFGE TYIDGWIILG SSATDKDGRS GQLMNMVEAL VPGIYRISFN TGKYNPDGFF
301: PYVSIVFEIK ESQKWDHFHV PLLLSPFSLS TYRGS
101: WNARYREKFG FVFLICASGR STPEILTELK IRYQNRPIIE FEIAAQEQMK ITELRLSRLF SDKADTAPAV KPLSTTNIAT KAEEDRVNII GAHLTAATRA
201: AGAKPAHNPI RTRPPITTHV LDTSRGCPAN GIEVRLEMWK DNQARPQFGE TYIDGWIILG SSATDKDGRS GQLMNMVEAL VPGIYRISFN TGKYNPDGFF
301: PYVSIVFEIK ESQKWDHFHV PLLLSPFSLS TYRGS
001: MAMEIGEDEW KVCCGSSEFA KQMSTSGPLT SQEAIYTARD IWFNQVNVTD WLEAFSAHPQ IGNTPSPSIN SDFARRSVSE QSTAFATTSA SALQELAEWN
101: VLYKKKFGFI FIICASGRTH AEMLHALKER YENRPIVELE IAAMEQMKIT ELRMAKLFSD KAKVISETDS SSSPVSTKPQ DRLRIIGGHL NVAAEAKAPK
201: RSRPPITTHV LDVSRGAPAA GVEVHLEVWS GTTGPSFVHG GGGVWSSVGT SATDRDGRSG PLMDLVDALN PGTYRISFDT AKYSPGCFFP YVSIVFQVTE
301: SQKWEHFHVP LLLAPFSFST YRGS
101: VLYKKKFGFI FIICASGRTH AEMLHALKER YENRPIVELE IAAMEQMKIT ELRMAKLFSD KAKVISETDS SSSPVSTKPQ DRLRIIGGHL NVAAEAKAPK
201: RSRPPITTHV LDVSRGAPAA GVEVHLEVWS GTTGPSFVHG GGGVWSSVGT SATDRDGRSG PLMDLVDALN PGTYRISFDT AKYSPGCFFP YVSIVFQVTE
301: SQKWEHFHVP LLLAPFSFST YRGS
Arabidopsis Description
TTLUric acid degradation bifunctional protein TTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.