Factsheet for HORVU4Hr1G057650.8

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 1
plasma membrane 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G068000.2
HORVU3Hr1G068010.1
HORVU3Hr1G068020.2
HORVU4Hr1G057640.1
HORVU4Hr1G057650.8

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58220.1	HORVU3Hr1G068000.2	AT4G39400.1	15319482
AT5G58220.1	HORVU3Hr1G068010.1	AT4G39400.1	15319482
AT5G58220.1	HORVU3Hr1G068020.2	AT4G39400.1	15319482
AT5G58220.1	HORVU4Hr1G057640.1	AT5G58220.1	21798944
AT5G58220.1	HORVU4Hr1G057650.8	AT5G58220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G199200.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	93.98	93.98
TraesCS4A01G104800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	93.67	93.67
TraesCS4D01G200200.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	93.37	93.37
Os03t0390700-01	Rice	plasma membrane	84.04	83.53
OQU92482	Sorghum	cytosol	83.43	83.43
Zm00001d047217_P001	Maize	cytosol	75.9	73.68
GSMUA_Achr5P13910_001	Banana	peroxisome	64.46	64.46
HORVU4Hr1G057640.1	Barley	cytosol	12.05	63.49
VIT_09s0018g01180.t01	Wine grape	cytosol, nucleus, peroxisome	60.54	60.91
Solyc01g080940.2.1	Tomato	cytoskeleton, cytosol, peroxisome	57.83	57.31
PGSC0003DMT400004592	Potato	cytoskeleton, cytosol, peroxisome	57.23	56.72
KRH07309	Soybean	cytosol, nucleus, peroxisome	56.63	56.63
KRH66244	Soybean	cytosol, nucleus, peroxisome	56.63	56.63
Bra020380.1-P	Field mustard	cytosol, nucleus, peroxisome	53.61	55.62
CDY02804	Canola	cytosol	52.71	55.2
CDY32716	Canola	cytosol	53.01	55.0
GSMUA_Achr5P13880_001	Banana	cytosol	27.71	51.69
AT5G58220.1	Thale cress	cytosol	49.7	50.93

Protein Annotations

KEGG:00230+3.5.2.17	KEGG:00230+4.1.1.97	Gene3D:1.10.3330.10	Gene3D:2.60.40.180	MapMan:6.1.4.7	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006144	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0033971	EnsemblPlantsGene:HORVU4Hr1G057650	EnsemblPlants:HORVU4Hr1G057650.8	InterPro:Hydroxyisourate_hydrolase	InterPro:IPR036778
InterPro:IPR036817	UniProt:M0XA90	InterPro:OHCU_decarboxylase	InterPro:OHCU_decarboxylase_sf	PFAM:PF00576	PFAM:PF09349
PRINTS:PR00189	ScanProsite:PS00768	PANTHER:PTHR10395	PANTHER:PTHR10395:SF7	SUPFAM:SSF158694	SUPFAM:SSF49472
TIGRFAMs:TIGR02962	InterPro:Thyroxine_BS	InterPro:Transthyretin/HIU_hydrolase	InterPro:Transthyretin/HIU_hydrolase_d	InterPro:Transthyretin/HIU_hydrolase_sf	UniParc:UPI000296BA03
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:483705904..483712120

Molecular Weight (calculated)

36259.6 Da

IEP (calculated)

6.731

GRAVY (calculated)

-0.245

Length

332 amino acids

Sequence
(BLAST)

001: MATLRPLSVE EVLRVNGSHR FAAALAAASP FDSLANALLA ARRIWLNEVD VTGWLEAFAA HPPIGSTSSS VSKWSKEEQS AALSTATDST AQELSEWNAK
101: YREKFGFVFM ICASGRTAPE VLAELKRRYA NRPVVELEAA AEEELKITEL RLAKLFASET AAPPTSGENQ ISQPDKAADR MRIIGAHLGA LSQLSAYKAP
201: EITGNSNRTR PPITTHVLDT ALGSPASGIE VHLEMWKDAS STPSFDNKDF KGWTTLGSSI TNNDGRSGQL MDIVDNVTPG FYRISFNTSK YAPSGFFPYV
301: SIIFEIKRSQ ATEHFHVPLL HSPFSFTTYR GS

Best Arabidopsis Sequence Match ( AT5G58220.1 )
(BLAST)

001: MAMEIGEDEW KVCCGSSEFA KQMSTSGPLT SQEAIYTARD IWFNQVNVTD WLEAFSAHPQ IGNTPSPSIN SDFARRSVSE QSTAFATTSA SALQELAEWN
101: VLYKKKFGFI FIICASGRTH AEMLHALKER YENRPIVELE IAAMEQMKIT ELRMAKLFSD KAKVISETDS SSSPVSTKPQ DRLRIIGGHL NVAAEAKAPK
201: RSRPPITTHV LDVSRGAPAA GVEVHLEVWS GTTGPSFVHG GGGVWSSVGT SATDRDGRSG PLMDLVDALN PGTYRISFDT AKYSPGCFFP YVSIVFQVTE
301: SQKWEHFHVP LLLAPFSFST YRGS

Arabidopsis Description

TTLUric acid degradation bifunctional protein TTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.