Factsheet for GSMUA_Achr5P13910_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
plasma membrane 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001
GSMUA_Achr4P08920_001
GSMUA_Achr5P13880_001
GSMUA_Achr5P13910_001
GSMUA_Achr6P35950_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58220.1	GSMUA_Achr1P05250_001	AT4G39400.1	15319482
AT5G58220.1	GSMUA_Achr4P08920_001	AT4G39400.1	15319482
AT5G58220.1	GSMUA_Achr6P35950_001	AT4G39400.1	15319482
AT5G58220.1	GSMUA_AchrUn_...	AT4G39400.1	15319482
AT5G58220.1	GSMUA_Achr5P13880_001	AT5G58220.1	21798944
AT5G58220.1	GSMUA_Achr5P13910_001	AT5G58220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P13880_001	Banana	cytosol	38.86	72.47
Os03t0390700-01	Rice	plasma membrane	66.57	66.17
OQU92482	Sorghum	cytosol	65.66	65.66
HORVU4Hr1G057650.8	Barley	cytosol, mitochondrion, peroxisome, plastid	64.46	64.46
TraesCS4D01G200200.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.55	63.55
TraesCS4B01G199200.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.55	63.55
TraesCS4A01G104800.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	63.25	63.25
TraesCS1A01G421400.1	Wheat	plastid	31.02	61.31
VIT_09s0018g01180.t01	Wine grape	cytosol, nucleus, peroxisome	60.84	61.21
Bra020380.1-P	Field mustard	cytosol, nucleus, peroxisome	58.43	60.62
Zm00001d047217_P001	Maize	cytosol	62.05	60.23
CDY32716	Canola	cytosol	57.83	60.0
CDY02804	Canola	cytosol	57.23	59.94
KRH07309	Soybean	cytosol, nucleus, peroxisome	59.64	59.64
KRH66244	Soybean	cytosol, nucleus, peroxisome	58.43	58.43
Solyc01g080940.2.1	Tomato	cytoskeleton, cytosol, peroxisome	58.73	58.21
PGSC0003DMT400004592	Potato	cytoskeleton, cytosol, peroxisome	58.43	57.91
AT5G58220.1	Thale cress	cytosol	55.42	56.79
HORVU4Hr1G057640.1	Barley	cytosol	9.04	47.62

Protein Annotations

KEGG:00230+3.5.2.17	KEGG:00230+4.1.1.97	Gene3D:1.10.3330.10	Gene3D:2.60.40.180	MapMan:6.1.4.7	GO:GO:0003674
GO:GO:0003824	GO:GO:0006139	GO:GO:0006144	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0033971	EnsemblPlantsGene:GSMUA_Achr5G13910_001	EnsemblPlants:GSMUA_Achr5P13910_001	EnsemblPlants:GSMUA_Achr5T13910_001	InterPro:Hydroxyisourate_hydrolase
InterPro:IPR036778	InterPro:IPR036817	UniProt:M0SYC0	InterPro:OHCU_decarboxylase	InterPro:OHCU_decarboxylase_sf	PFAM:PF00576
PFAM:PF09349	PRINTS:PR00189	ScanProsite:PS00768	PANTHER:PTHR10395	PANTHER:PTHR10395:SF7	SUPFAM:SSF158694
SUPFAM:SSF49472	TIGRFAMs:TIGR02962	InterPro:Thyroxine_BS	InterPro:Transthyretin/HIU_hydrolase	InterPro:Transthyretin/HIU_hydrolase_d	InterPro:Transthyretin/HIU_hydrolase_sf
UniParc:UPI000296E6C6	:	:	:	:	:

Description

Uric acid degradation bifunctional protein TTL [Source:GMGC_GENE;Acc:GSMUA_Achr5G13910_001]

Coordinates

chr5:-:10004011..10008219

Molecular Weight (calculated)

36866.0 Da

IEP (calculated)

7.102

GRAVY (calculated)

-0.251

Length

332 amino acids

Sequence
(BLAST)

001: MTALSCMEED VLRCCGSKRF AKEMVSASPF TDLDHALRSA RDIWLNKVDV VGWLEAFAAH PAIGTTSPSV SQWCKEEQSA AMATANDSAL QELMEWNSRY
101: REKFGFVFLI CASGRGTPEI LAELKKRYLN RPIVELEIAA QEEMKITELR LARLFNSDAG SNIPVTTRLP VSSPTKPEDR LGIIGAHIMA IPKVPSSKTT
201: EISGNSHRTR PPITTHVLDV ARGSPASGME VHLEMWKGTQ QHPSFTNRES TDWMLIGSST TNTDGRSGPL MGIVDHITPG FYRISFDTGK YAPSGFFPYV
301: SLVFQVRENQ IAEHFHVPLL HSPFSFTTYR GS

Best Arabidopsis Sequence Match ( AT5G58220.1 )
(BLAST)

001: MAMEIGEDEW KVCCGSSEFA KQMSTSGPLT SQEAIYTARD IWFNQVNVTD WLEAFSAHPQ IGNTPSPSIN SDFARRSVSE QSTAFATTSA SALQELAEWN
101: VLYKKKFGFI FIICASGRTH AEMLHALKER YENRPIVELE IAAMEQMKIT ELRMAKLFSD KAKVISETDS SSSPVSTKPQ DRLRIIGGHL NVAAEAKAPK
201: RSRPPITTHV LDVSRGAPAA GVEVHLEVWS GTTGPSFVHG GGGVWSSVGT SATDRDGRSG PLMDLVDALN PGTYRISFDT AKYSPGCFFP YVSIVFQVTE
301: SQKWEHFHVP LLLAPFSFST YRGS

Arabidopsis Description

TTLUric acid degradation bifunctional protein TTL [Source:UniProtKB/Swiss-Prot;Acc:Q9LVM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.