Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plasma membrane 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G193600.1 | Wheat | plasma membrane | 96.8 | 88.8 |
| TraesCS6D01G154800.2 | Wheat | mitochondrion, nucleus, plasma membrane, plastid | 96.97 | 86.49 |
| HORVU6Hr1G033670.5 | Barley | plasma membrane | 91.67 | 82.94 |
| TraesCS3A01G423400.1 | Wheat | plasma membrane | 68.1 | 61.71 |
| EES06446 | Sorghum | plasma membrane | 60.61 | 59.21 |
| Zm00001d015853_P001 | Maize | plasma membrane | 60.02 | 55.49 |
| GSMUA_Achr8P00900_001 | Banana | plasma membrane | 46.04 | 54.43 |
| Os02t0194400-02 | Rice | plastid | 64.73 | 54.42 |
| GSMUA_Achr5P25270_001 | Banana | plasma membrane | 36.7 | 51.6 |
| VIT_05s0062g01100.t01 | Wine grape | plasma membrane | 52.44 | 48.26 |
| PGSC0003DMT400055685 | Potato | cytosol, plasma membrane, plastid | 50.08 | 48.14 |
| Solyc09g098420.1.1 | Tomato | plasma membrane | 49.49 | 46.3 |
| AT5G07280.1 | Thale cress | plasma membrane | 41.33 | 41.19 |
| CDX70023 | Canola | plasma membrane | 28.87 | 41.03 |
| Bra009277.1-P | Field mustard | plasma membrane | 41.67 | 40.15 |
| CDX98990 | Canola | plasma membrane | 30.56 | 39.2 |
| KRG91463 | Soybean | plasma membrane | 41.84 | 39.2 |
| KRH35354 | Soybean | plasma membrane | 41.08 | 38.46 |
| TraesCS5A01G177300.1 | Wheat | plasma membrane | 31.23 | 30.64 |
| TraesCS3A01G245000.1 | Wheat | plasma membrane | 28.62 | 30.28 |
| TraesCS3A01G099400.1 | Wheat | plasma membrane | 29.29 | 29.9 |
| TraesCS2A01G182400.1 | Wheat | plasma membrane | 23.74 | 25.41 |
| TraesCS3A01G490100.1 | Wheat | plasma membrane | 18.35 | 24.36 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.1.7.2 | MapMan:18.4.1.10.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf |
| InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 | PFAM:PF07714 | PFAM:PF13516 |
| PFAM:PF13855 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27000 | PANTHER:PTHR27000:SF163 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00369 | SUPFAM:SSF52047 | SUPFAM:SSF52058 |
| SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6A01G166200 | EnsemblPlants:TraesCS6A01G166200.1 |
| TIGR:cd14066 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:169190324..169193890
Molecular Weight (calculated)
129205.0 Da
IEP (calculated)
6.667
GRAVY (calculated)
0.056
Length
1188 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGNLRQLQYL DLSNNQLAGP LPVSLFDLKM LKELVLDKNC LSGQLSPAIG QLQHLTKLSM SMNSISGSLP PELGTLQNLE FLNLNRNTFS GSLPAAFSNL
0101: TRLSYLAASN NSLTGSIFPG IGTLVNLRRL VLSSNGLTGP IPEEIGQLEN LEVINLMNNG FTESIPEEIG HLKRLKVLKL SNCKFNGAIP RSIGGLESLM
0201: TLDISGNNFT AELPTSVGEL SNLIKLLAVR AGLTGAIPKE LGNCKKITVI DLSFNHFTGS IPEELAELEA IISFKAEGNR LSGHIPDWLQ NWGNIKSISL
0301: VNNMFSGPLP LLPLQHLVEF SAGKNLLSGP IPAGVCQAIS LRSLNLYSNN LTGSIKETFK GCRNLTILSL QVNQLCSEIP EYLAELPLVS LDLTQNNFTG
0401: SLPDKFWESS TVQELYLSDN NLTGMIPESI AELSHLKILR IDNNYLEGPI PRSVGTLKSL ITLSLRCNML SGNIPVELFN CTNLVTLDLS YNSLTGHIPR
0501: EISRLTLLNS LALSNNQLSG TIPSEICVGF SHASHVDLRF YQHQRLLDLS YNQLTGQIPT TIKDCAVVAE LYLQGNLLNG TIPAELGELM GLATIDLSFN
0601: ALVGHMLPWS APSVQLQGLS LSNNRLNGSI PAEIGHILPA IYKLNLSGNT LTGNLPQSLL CNHHLSRLDV SNNNLSGEIL FSCPDGDEGS ASALNTFNAS
0701: NNHFSGSLDV SISNFTGLTS LDIHSNSLNG SLPSAVCNVT TLNYLDLSSN DFSGTIPCGI CDMFNLVFAN FSGNHIVGTY NLADCAANNI NHKAAHPSYQ
0801: VSLAAIVCGI TIIIILLVLL GVYLRRRLLK RRSSWALVPA SKTMVTSEET LRSKLLGKKS REPLSINLAT FEHSLMRVAA DDILKATENF SNLHIIGDGG
0901: FGTVYRAALF GGRQVAVKRL HGGHQLQDNR EFQAEIETIG KVKHPNLVPL LGYCASGDER FLIYEYMEHG CLEAWLRKNR TDAAYSLGWP DRLKICLGSA
1001: KGLAFLHHGF VPHIIHRDMK SSNILLDWDL EPRVSDFGLA RIISACETHV STNLAGTLGY IPPEYGLSMR CTARGDVYSF GVVMLELLTG QEPTGQEVDE
1101: GGGSLIGWVQ WMVARRREKE VFDPCLLPAS GACRQQMARV LAIARGCTAD DPWARPTMLE VVKGLKATQM MESTPPATTT LSRAGLRW
0101: TRLSYLAASN NSLTGSIFPG IGTLVNLRRL VLSSNGLTGP IPEEIGQLEN LEVINLMNNG FTESIPEEIG HLKRLKVLKL SNCKFNGAIP RSIGGLESLM
0201: TLDISGNNFT AELPTSVGEL SNLIKLLAVR AGLTGAIPKE LGNCKKITVI DLSFNHFTGS IPEELAELEA IISFKAEGNR LSGHIPDWLQ NWGNIKSISL
0301: VNNMFSGPLP LLPLQHLVEF SAGKNLLSGP IPAGVCQAIS LRSLNLYSNN LTGSIKETFK GCRNLTILSL QVNQLCSEIP EYLAELPLVS LDLTQNNFTG
0401: SLPDKFWESS TVQELYLSDN NLTGMIPESI AELSHLKILR IDNNYLEGPI PRSVGTLKSL ITLSLRCNML SGNIPVELFN CTNLVTLDLS YNSLTGHIPR
0501: EISRLTLLNS LALSNNQLSG TIPSEICVGF SHASHVDLRF YQHQRLLDLS YNQLTGQIPT TIKDCAVVAE LYLQGNLLNG TIPAELGELM GLATIDLSFN
0601: ALVGHMLPWS APSVQLQGLS LSNNRLNGSI PAEIGHILPA IYKLNLSGNT LTGNLPQSLL CNHHLSRLDV SNNNLSGEIL FSCPDGDEGS ASALNTFNAS
0701: NNHFSGSLDV SISNFTGLTS LDIHSNSLNG SLPSAVCNVT TLNYLDLSSN DFSGTIPCGI CDMFNLVFAN FSGNHIVGTY NLADCAANNI NHKAAHPSYQ
0801: VSLAAIVCGI TIIIILLVLL GVYLRRRLLK RRSSWALVPA SKTMVTSEET LRSKLLGKKS REPLSINLAT FEHSLMRVAA DDILKATENF SNLHIIGDGG
0901: FGTVYRAALF GGRQVAVKRL HGGHQLQDNR EFQAEIETIG KVKHPNLVPL LGYCASGDER FLIYEYMEHG CLEAWLRKNR TDAAYSLGWP DRLKICLGSA
1001: KGLAFLHHGF VPHIIHRDMK SSNILLDWDL EPRVSDFGLA RIISACETHV STNLAGTLGY IPPEYGLSMR CTARGDVYSF GVVMLELLTG QEPTGQEVDE
1101: GGGSLIGWVQ WMVARRREKE VFDPCLLPAS GACRQQMARV LAIARGCTAD DPWARPTMLE VVKGLKATQM MESTPPATTT LSRAGLRW
0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I
Arabidopsis Description
Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.