Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G080200.1 | Wheat | extracellular | 79.57 | 79.57 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 77.42 | 77.42 |
| CDY01265 | Canola | extracellular | 18.82 | 55.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.03 | 50.0 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 58.6 | 49.1 |
| GSMUA_Achr9P01220_001 | Banana | cytosol | 28.49 | 49.07 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 17.2 | 47.76 |
| PGSC0003DMT400081204 | Potato | cytosol | 32.8 | 45.19 |
| GSMUA_Achr8P26310_001 | Banana | cytosol | 28.49 | 42.74 |
| KRH41105 | Soybean | cytosol | 26.34 | 41.53 |
| Solyc11g006850.1.1 | Tomato | extracellular | 28.49 | 39.26 |
| PGSC0003DMT400092903 | Potato | cytosol | 28.49 | 39.26 |
| Bra013852.1-P | Field mustard | golgi, plasma membrane | 36.02 | 39.18 |
| CDX84078 | Canola | cytosol, extracellular, mitochondrion, plastid | 19.35 | 39.13 |
| AT1G32583.1 | Thale cress | extracellular | 37.63 | 39.11 |
| CDY34331 | Canola | plasma membrane | 35.48 | 38.37 |
| CDX73256 | Canola | extracellular | 35.48 | 37.5 |
| KRH54147 | Soybean | plasma membrane | 35.48 | 37.08 |
| VIT_00s0194g00170.t01 | Wine grape | extracellular | 34.41 | 36.78 |
| CDY26905 | Canola | extracellular | 33.87 | 35.8 |
| Bra010173.1-P | Field mustard | extracellular | 33.87 | 35.8 |
| Solyc03g097530.2.1 | Tomato | extracellular, plasma membrane | 32.8 | 34.66 |
| AT4G24972.1 | Thale cress | plasma membrane | 32.8 | 34.66 |
| KRH63800 | Soybean | extracellular | 32.8 | 30.5 |
| CDY01257 | Canola | cytosol, extracellular, plastid | 21.51 | 29.85 |
| TraesCS4B01G107400.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 27.42 | 29.31 |
| PGSC0003DMT400034771 | Potato | cytosol | 28.49 | 26.5 |
| Solyc11g012650.1.1 | Tomato | extracellular | 28.49 | 25.98 |
| TraesCS4B01G075800.1 | Wheat | plastid | 24.73 | 24.6 |
| CDY03399 | Canola | extracellular, golgi | 34.41 | 22.78 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G096400.1 | EnsemblPlantsGene:TraesCS2B01G096400 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF26 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | MapMan:11.10.1.7.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:56714333..56715260
Molecular Weight (calculated)
19006.7 Da
IEP (calculated)
5.698
GRAVY (calculated)
0.319
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MMASFWPLCA LVVLLAAVGS VSIASASVAD AGSSSLNSSL LASAAPPPTA VLPRKVLRPA GVGADVPHRV SLGCAGADDI AIEQGPGTTL PSGVPSYTVD
101: IINRCSGAGR EACAISGIRV RCGWFSSVTL VDPSKFRRVA PDDCLVNDGK PLLADDTISF EYANSFQYKL SVAKATCVHP AADTSD
101: IINRCSGAGR EACAISGIRV RCGWFSSVTL VDPSKFRRVA PDDCLVNDGK PLLADDTISF EYANSFQYKL SVAKATCVHP AADTSD
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.