Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- plastid 2
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol | 58.06 | 66.67 |
| CDY01265 | Canola | extracellular | 32.26 | 63.49 |
| GSMUA_Achr9P01220_001 | Banana | cytosol | 53.23 | 61.11 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 32.26 | 59.7 |
| CDX84078 | Canola | cytosol, extracellular, mitochondrion, plastid | 32.26 | 43.48 |
| VIT_00s0194g00170.t01 | Wine grape | extracellular | 59.68 | 42.53 |
| Bra010173.1-P | Field mustard | extracellular | 58.87 | 41.48 |
| CDY26905 | Canola | extracellular | 58.87 | 41.48 |
| CDX73256 | Canola | extracellular | 56.45 | 39.77 |
| AT1G32583.1 | Thale cress | extracellular | 54.03 | 37.43 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 42.74 | 33.54 |
| CDY01257 | Canola | cytosol, extracellular, plastid | 34.68 | 32.09 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 20.16 | 29.76 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 42.74 | 28.49 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 41.94 | 27.96 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 41.94 | 27.96 |
| Zm00001d023681_P001 | Maize | extracellular | 41.94 | 24.3 |
| OQU79047 | Sorghum | plastid | 41.94 | 23.96 |
| Os12t0472500-01 | Rice | plasma membrane | 43.55 | 23.89 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 41.94 | 23.64 |
| TraesCS1D01G119800.1 | Wheat | plastid | 41.94 | 23.64 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 41.94 | 23.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P26310_001 | EnsemblPlants:GSMUA_Achr8T26310_001 | EnsemblPlantsGene:GSMUA_Achr8G26310_001 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF26 | SEG:seg |
| UniParc:UPI0002954969 | UniProt:M0TTT4 | MapMan:11.10.1.7.1 | : | : | : |
Description
TPD1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G26310_001]
Coordinates
chr8:-:29916337..29916711
Molecular Weight (calculated)
13471.0 Da
IEP (calculated)
5.076
GRAVY (calculated)
0.015
Length
124 amino acids
Sequence
(BLAST)
(BLAST)
001: MCVSVHIGGG SEEGTRAERM GEEECSKDDI LLYQGATAPL PNGIPTYTVQ ILNACPTRCS VADIHVRCGW FSSARLINPL LFRRLRFDDC LVNDGAALAS
101: GESLSFQYAN TYRYPLSVSS VACC
101: GESLSFQYAN TYRYPLSVSS VACC
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.