Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01265 | Canola | extracellular | 46.27 | 98.41 |
| CDX84078 | Canola | cytosol, extracellular, mitochondrion, plastid | 32.09 | 46.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.09 | 39.81 |
| CDX73256 | Canola | extracellular | 47.01 | 35.8 |
| CDY26905 | Canola | extracellular | 47.01 | 35.8 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 22.39 | 35.71 |
| GSMUA_Achr8P26310_001 | Banana | cytosol | 32.09 | 34.68 |
| AT1G32583.1 | Thale cress | extracellular | 45.52 | 34.08 |
| CDY34331 | Canola | plasma membrane | 36.57 | 28.49 |
| VIT_00s0194g00170.t01 | Wine grape | extracellular | 34.33 | 26.44 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 30.6 | 25.95 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 31.34 | 22.58 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 30.6 | 22.04 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 29.85 | 21.51 |
| Zm00001d023681_P001 | Maize | extracellular | 33.58 | 21.03 |
| OQU79047 | Sorghum | plastid | 33.58 | 20.74 |
| Os12t0472500-01 | Rice | plasma membrane | 34.33 | 20.35 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 32.09 | 19.55 |
| TraesCS1D01G119800.1 | Wheat | plastid | 32.09 | 19.55 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 32.09 | 19.37 |
| CDY03399 | Canola | extracellular, golgi | 35.07 | 16.73 |
Protein Annotations
| EnsemblPlants:CDY01257 | EnsemblPlantsGene:GSBRNA2T00111429001 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF26 | ProteinID:CDY01257 | ProteinID:CDY01257.1 |
| SEG:seg | UniParc:UPI0004EDFAFA | MapMan:11.10.1.7.1 | : | : | : |
Description
BnaC05g24750D
Coordinates
chrLK031925:+:801214..802360
Molecular Weight (calculated)
15248.6 Da
IEP (calculated)
8.364
GRAVY (calculated)
0.134
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MQETLFLVTT TTPPFPESLC YLLIFATGQK DRDKIAQKMI LAMFAQRFHF QTEFLPSQLR SSTPCLSDCK IMEINVTCGW FSSVKLVNPR VFRRLSYYDC
101: LVKDGQPLAP GQTLSFLYAN SFSYPLSVSS VSCF
101: LVKDGQPLAP GQTLSFLYAN SFSYPLSVSS VSCF
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.