Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01265 | Canola | extracellular | 29.61 | 84.13 |
| Bra010173.1-P | Field mustard | extracellular | 65.92 | 67.05 |
| CDY26905 | Canola | extracellular | 65.92 | 67.05 |
| CDX73256 | Canola | extracellular | 65.36 | 66.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.87 | 61.11 |
| CDX84078 | Canola | cytosol, extracellular, mitochondrion, plastid | 30.73 | 59.78 |
| GSMUA_Achr8P26310_001 | Banana | cytosol | 37.43 | 54.03 |
| VIT_00s0194g00170.t01 | Wine grape | extracellular | 48.6 | 50.0 |
| CDY01257 | Canola | cytosol, extracellular, plastid | 34.08 | 45.52 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 34.64 | 39.24 |
| AT4G24972.1 | Thale cress | plasma membrane | 38.55 | 39.2 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 17.88 | 38.1 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 39.11 | 37.63 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 37.43 | 36.02 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 36.87 | 35.48 |
| TraesCS1D01G119800.1 | Wheat | plastid | 39.66 | 32.27 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 39.66 | 31.98 |
| Os12t0472500-01 | Rice | plasma membrane | 40.22 | 31.86 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 39.11 | 31.82 |
| OQU79047 | Sorghum | plastid | 37.99 | 31.34 |
| Zm00001d023681_P001 | Maize | extracellular | 34.08 | 28.5 |
Protein Annotations
| MapMan:11.10.1.7.1 | EntrezGene:3766880 | UniProt:A0A178WL25 | EMBL:AC055769 | ProteinID:AEE31507.1 | ProteinID:ANM60616.1 |
| ArrayExpress:AT1G32583 | EnsemblPlantsGene:AT1G32583 | RefSeq:AT1G32583 | TAIR:AT1G32583 | RefSeq:AT1G32583-TAIR-G | EnsemblPlants:AT1G32583.1 |
| TAIR:AT1G32583.1 | Unigene:At.49435 | EMBL:DQ487503 | GO:GO:0003674 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009408 | GO:GO:0009628 | RefSeq:NP_001031128.1 | RefSeq:NP_001322889.1 | ProteinID:OAP18591.1 | PO:PO:0000293 |
| PANTHER:PTHR33184 | PANTHER:PTHR33184:SF26 | UniProt:Q1G3T1 | SignalP:SignalP-TM | UniParc:UPI00005DBF67 | SEG:seg |
Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
Coordinates
chr1:+:11785806..11788286
Molecular Weight (calculated)
19885.6 Da
IEP (calculated)
6.743
GRAVY (calculated)
-0.030
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.