Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P01220_001 | Banana | cytosol | 67.59 | 67.59 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 40.74 | 65.67 |
| CDY01265 | Canola | extracellular | 37.04 | 63.49 |
| GSMUA_Achr8P26310_001 | Banana | cytosol | 66.67 | 58.06 |
| CDX84078 | Canola | cytosol, extracellular, mitochondrion, plastid | 33.33 | 39.13 |
| Bra010173.1-P | Field mustard | extracellular | 62.04 | 38.07 |
| CDY26905 | Canola | extracellular | 62.04 | 38.07 |
| VIT_00s0194g00170.t01 | Wine grape | extracellular | 60.19 | 37.36 |
| CDX73256 | Canola | extracellular | 60.19 | 36.93 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 28.7 | 36.9 |
| AT1G32583.1 | Thale cress | extracellular | 61.11 | 36.87 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 53.7 | 36.71 |
| CDY01257 | Canola | cytosol, extracellular, plastid | 39.81 | 32.09 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 52.78 | 30.65 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 50.93 | 29.57 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 50.0 | 29.03 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 52.78 | 25.91 |
| TraesCS1D01G119800.1 | Wheat | plastid | 52.78 | 25.91 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 52.78 | 25.68 |
| Os12t0472500-01 | Rice | plasma membrane | 53.7 | 25.66 |
| OQU79047 | Sorghum | plastid | 50.0 | 24.88 |
| Zm00001d023681_P001 | Maize | extracellular | 49.07 | 24.77 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP13270_001 | EnsemblPlants:GSMUA_AchrUn_randomT13270_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG13270_001 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF26 | UniParc:UPI00029655C6 |
| UniProt:M0U8T6 | MapMan:11.10.1.7.1 | : | : | : | : |
Description
TPD1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG13270_001]
Coordinates
chrchrUn_random:-:63881371..63881697
Molecular Weight (calculated)
11637.8 Da
IEP (calculated)
4.606
GRAVY (calculated)
0.058
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEMTGEEVC SKDDIVVHQE ATPPLPSGIP TYTVQVLNTC PSGCAVAGIH LSCGWYGSAR LVDPRIFRRL SYNDCLVNDG ASLPAGDSIS FQYANSFRYP
101: LSVSSVTC
101: LSVSSVTC
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.