Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G093530.7 | |
| HORVU6Hr1G033670.5 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24972.1 | HORVU3Hr1G093530.7 | AT5G07280.1 | 18250314 |
| AT4G24972.1 | HORVU6Hr1G033670.5 | AT5G07280.1 | 18250314 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01265 | Canola | extracellular | 35.71 | 47.62 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 35.71 | 44.78 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 71.43 | 37.97 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.9 | 28.7 |
| GSMUA_Achr9P01220_001 | Banana | cytosol | 36.9 | 28.7 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 71.43 | 27.27 |
| TraesCS1D01G119800.1 | Wheat | plastid | 71.43 | 27.27 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 71.43 | 27.03 |
| OQU79047 | Sorghum | plastid | 58.33 | 22.58 |
| CDY01257 | Canola | cytosol, extracellular, plastid | 35.71 | 22.39 |
| Zm00001d023681_P001 | Maize | extracellular | 54.76 | 21.5 |
| Os12t0472500-01 | Rice | plasma membrane | 55.95 | 20.8 |
| PGSC0003DMT400081204 | Potato | cytosol | 33.33 | 20.74 |
| CDX84078 | Canola | cytosol, extracellular, mitochondrion, plastid | 22.62 | 20.65 |
| GSMUA_Achr8P26310_001 | Banana | cytosol | 29.76 | 20.16 |
| Solyc11g006850.1.1 | Tomato | extracellular | 30.95 | 19.26 |
| KRH41105 | Soybean | cytosol | 26.19 | 18.64 |
| PGSC0003DMT400092903 | Potato | cytosol | 29.76 | 18.52 |
| CDY26905 | Canola | extracellular | 38.1 | 18.18 |
| CDX73256 | Canola | extracellular | 38.1 | 18.18 |
| Bra010173.1-P | Field mustard | extracellular | 38.1 | 18.18 |
| AT1G32583.1 | Thale cress | extracellular | 38.1 | 17.88 |
| Bra013852.1-P | Field mustard | golgi, plasma membrane | 33.33 | 16.37 |
| CDY34331 | Canola | plasma membrane | 33.33 | 16.28 |
| Solyc03g097530.2.1 | Tomato | extracellular, plasma membrane | 33.33 | 15.91 |
| AT4G24972.1 | Thale cress | plasma membrane | 33.33 | 15.91 |
| KRH54147 | Soybean | plasma membrane | 32.14 | 15.17 |
| HORVU4Hr1G016500.2 | Barley | extracellular, vacuole | 30.95 | 15.12 |
| VIT_00s0194g00170.t01 | Wine grape | extracellular | 30.95 | 14.94 |
| HORVU4Hr1G016460.1 | Barley | extracellular, golgi | 29.76 | 14.79 |
| HORVU0Hr1G036340.1 | Barley | extracellular, golgi | 29.76 | 14.79 |
| Solyc11g012650.1.1 | Tomato | extracellular | 33.33 | 13.73 |
| PGSC0003DMT400034771 | Potato | cytosol | 32.14 | 13.5 |
| KRH63800 | Soybean | extracellular | 28.57 | 12.0 |
| CDY03399 | Canola | extracellular, golgi | 34.52 | 10.32 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G058610.2 | EnsemblPlantsGene:HORVU7Hr1G058610 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF26 | SEG:seg | UniParc:UPI000B473927 |
| UniProt:A0A287WMP4 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:260094035..260094289
Molecular Weight (calculated)
6474.6 Da
IEP (calculated)
4.402
GRAVY (calculated)
-0.017
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: XXXXXXXXXX XXXXXXXXXX XXXXSVSLVD PRKFRRLARD DCLLNDGQPL LAGETISFEY SNSFPYQLSV AVATCVDPAA ATSP
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.