Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G016460.1 | Barley | extracellular, golgi | 100.0 | 100.0 |
| TraesCS4D01G104500.2 | Wheat | vacuole | 86.98 | 89.09 |
| TraesCS4A01G203700.1 | Wheat | extracellular | 88.17 | 88.17 |
| HORVU4Hr1G016500.2 | Barley | extracellular, vacuole | 73.37 | 72.09 |
| Os10t0207500-01 | Rice | extracellular | 39.05 | 39.05 |
| KXG38580 | Sorghum | extracellular | 39.65 | 38.51 |
| Zm00001d014205_P001 | Maize | extracellular | 35.5 | 35.5 |
| Zm00001d033019_P001 | Maize | extracellular | 34.32 | 32.58 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 14.79 | 29.76 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 24.85 | 26.58 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G036340.1 | EnsemblPlantsGene:HORVU0Hr1G036340 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | PFscan:PS51257 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI0002958EB1 | UniProt:M0XDM5 | MapMan:11.10.1.7.1 | : | : |
Description
No Description!
Coordinates
chrchrUn:-:226171124..226171721
Molecular Weight (calculated)
18001.5 Da
IEP (calculated)
4.484
GRAVY (calculated)
0.115
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MACFRIRLSA AAVVVVTMLL LQACSEVSAS SSPPQRQHQF RKMLSVNASS MPSSGGVGRS AEPLELEECS QDLLEVSQIN APSMAGGMPT YSVGITNTCI
101: DCLVCDVHIA CGDFASNDVI DPDKFRRLGF NDCLVNGGRS IEPSFPVSFQ YGNSFPYPMT VASASCDCN
101: DCLVCDVHIA CGDFASNDVI DPDKFRRLGF NDCLVNGGRS IEPSFPVSFQ YGNSFPYPMT VASASCDCN
001: MNRRRLLVSA TLLSYLLYGM ALVSVEASGG EKLRDNLDLT KTTTSSPSIS HRKMLLLSPG TGKTERSVEP ERIGEKCKST DIVVNQAVTE PMPNGIPGYM
101: VEITNQCMSG CIISRIHINC GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA
101: VEITNQCMSG CIISRIHINC GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA
Arabidopsis Description
TPD1TPD1 [Source:UniProtKB/TrEMBL;Acc:A0A178V0R1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.