Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014205_P001 | Maize | extracellular | 57.87 | 60.95 |
| KXG38580 | Sorghum | extracellular | 57.87 | 59.2 |
| Zm00001d000032_P001 | Maize | cytosol | 34.83 | 52.54 |
| Os10t0207500-01 | Rice | extracellular | 42.13 | 44.38 |
| Zm00001d040600_P001 | Maize | extracellular, plastid | 38.76 | 39.66 |
| HORVU4Hr1G016500.2 | Barley | extracellular, vacuole | 35.39 | 36.63 |
| TraesCS4D01G104500.2 | Wheat | vacuole | 33.15 | 35.76 |
| TraesCS4A01G203700.1 | Wheat | extracellular | 33.15 | 34.91 |
| HORVU0Hr1G036340.1 | Barley | extracellular, golgi | 32.58 | 34.32 |
| HORVU4Hr1G016460.1 | Barley | extracellular, golgi | 32.58 | 34.32 |
| TraesCS4B01G107400.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.15 | 33.91 |
| TraesCS4D01G104300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.58 | 33.33 |
| TraesCS4A01G203500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 31.46 | 32.18 |
| TraesCS4B01G075800.1 | Wheat | plastid | 30.9 | 29.41 |
| Zm00001d023681_P001 | Maize | extracellular | 32.58 | 27.1 |
Protein Annotations
| EMBL:EU976983 | EnsemblPlants:Zm00001d033019_P001 | EnsemblPlants:Zm00001d033019_T001 | EnsemblPlantsGene:Zm00001d033019 | EntrezGene:100286355 | PANTHER:PTHR33184 |
| PANTHER:PTHR33184:SF25 | ProteinID:ONM06609.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000182FEF2 |
| UniProt:B6UIB8 | MapMan:11.10.1.7.1 | : | : | : | : |
Description
TPD1
Coordinates
chr1:+:247131930..247133012
Molecular Weight (calculated)
18439.7 Da
IEP (calculated)
5.617
GRAVY (calculated)
0.117
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQRRFEDER AALATVASLL LILTTAQAAA AAASGRHLSL PTQKAAAARM NDTSSSDMQV ITPAPLAIST AARMGPDGCS GEDVAVYQSS ANPLPSGIPA
101: YTVRIINVCS GGCTVYDVHV SCGDFASTEL VDPAKFQRVG FNDCVVKGGG ALEPSETVSF QYSNSFSYHL SVASVACR
101: YTVRIINVCS GGCTVYDVHV SCGDFASTEL VDPAKFQRVG FNDCVVKGGG ALEPSETVSF QYSNSFSYHL SVASVACR
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.