Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G036340.1 | Barley | extracellular, golgi | 89.09 | 86.98 |
| HORVU4Hr1G016460.1 | Barley | extracellular, golgi | 89.09 | 86.98 |
| TraesCS4A01G203700.1 | Wheat | extracellular | 89.09 | 86.98 |
| TraesCS4D01G104300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 66.06 | 62.64 |
| Os10t0207500-01 | Rice | extracellular | 43.03 | 42.01 |
| KXG38580 | Sorghum | extracellular | 40.0 | 37.93 |
| Zm00001d014205_P001 | Maize | extracellular | 35.76 | 34.91 |
| Zm00001d033019_P001 | Maize | extracellular | 35.76 | 33.15 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 27.88 | 24.73 |
| TraesCS1D01G119800.1 | Wheat | plastid | 32.12 | 24.09 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G104500.2 | EnsemblPlantsGene:TraesCS4D01G104500 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | PFscan:PS51257 | SEG:seg |
| SignalP:SignalP-noTM | MapMan:11.10.1.7.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:82819505..82820139
Molecular Weight (calculated)
17391.5 Da
IEP (calculated)
4.279
GRAVY (calculated)
0.110
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MACFRSRSRA AAVVVVTMLL LQACSEVSAS SSPQFRKMLV SVNASSMSSS GGGGHSAEPL ELEECSKDLL EVFQNNAPSM AGGMPTYSVE ITNTCIDCAV
101: CDVHIACGDF ASNDVIDPDK FRRLGFNDCL VNGGGSIEPS FPVSFQYGNS FPYPMTVASA SCDCN
101: CDVHIACGDF ASNDVIDPDK FRRLGFNDCL VNGGGSIEPS FPVSFQYGNS FPYPMTVASA SCDCN
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.