Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG38580 | Sorghum | extracellular | 68.64 | 66.67 |
| Zm00001d033019_P001 | Maize | extracellular | 60.95 | 57.87 |
| Zm00001d000032_P001 | Maize | cytosol | 34.32 | 49.15 |
| Os10t0207500-01 | Rice | extracellular | 46.75 | 46.75 |
| Zm00001d040600_P001 | Maize | extracellular, plastid | 37.28 | 36.21 |
| TraesCS4A01G203700.1 | Wheat | extracellular | 36.09 | 36.09 |
| TraesCS4D01G104500.2 | Wheat | vacuole | 34.91 | 35.76 |
| HORVU0Hr1G036340.1 | Barley | extracellular, golgi | 35.5 | 35.5 |
| HORVU4Hr1G016460.1 | Barley | extracellular, golgi | 35.5 | 35.5 |
| TraesCS4B01G107400.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 36.09 | 35.06 |
| HORVU4Hr1G016500.2 | Barley | extracellular, vacuole | 33.73 | 33.14 |
| TraesCS4A01G203500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.73 | 32.76 |
| TraesCS4D01G104300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.73 | 32.76 |
| TraesCS4B01G075800.1 | Wheat | plastid | 34.32 | 31.02 |
| Zm00001d023681_P001 | Maize | extracellular | 30.18 | 23.83 |
Protein Annotations
| EMBL:BT087139 | EnsemblPlants:Zm00001d014205_P001 | EnsemblPlants:Zm00001d014205_T001 | EnsemblPlantsGene:Zm00001d014205 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 |
| ProteinID:AQK65549.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0001A4C27C | UniProt:C4J8J2 | MapMan:11.10.1.7.1 |
Description
Protein TAPETUM DETERMINANT 1
Coordinates
chr5:+:36552069..36553129
Molecular Weight (calculated)
17386.5 Da
IEP (calculated)
4.582
GRAVY (calculated)
0.249
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQWCFKKRA ALVIIVAISS LQLLLITAQE AGGDHEVWSS SSSPAGGRGG GAVVVPTARM GPDGSSTSCS GEEAVVVYQS SANPLPSGIP AYTVQIINVC
101: GGGCTVYDVH VSCGDFASTE LVDPAKFQRV AFDDCVVKGG AALEPSETVS FQYSNSFSYQ LSVASVACH
101: GGGCTVYDVH VSCGDFASTE LVDPAKFQRV AFDDCVVKGG AALEPSETVS FQYSNSFSYQ LSVASVACH
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.