Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G104300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 85.56 | 91.95 |
| TraesCS4A01G203500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 82.89 | 89.08 |
| TraesCS4B01G107400.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 69.52 | 74.71 |
| HORVU4Hr1G016500.2 | Barley | extracellular, vacuole | 63.1 | 68.6 |
| Os10t0207500-01 | Rice | extracellular | 32.09 | 35.5 |
| KXG38580 | Sorghum | extracellular | 32.09 | 34.48 |
| Zm00001d014205_P001 | Maize | extracellular | 31.02 | 34.32 |
| Zm00001d033019_P001 | Maize | extracellular | 29.41 | 30.9 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 24.6 | 24.73 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 25.67 | 21.62 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G075800.1 | EnsemblPlantsGene:TraesCS4B01G075800 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | SEG:seg | MapMan:11.10.1.7.1 |
Description
No Description!
Coordinates
chr4B:+:71753866..71754522
Molecular Weight (calculated)
20178.1 Da
IEP (calculated)
5.651
GRAVY (calculated)
0.002
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: LTSLRSENTK APAMACFQTR PSAAVVVVIT MFLLQACYEG SQASASSSLQ LQLPRHQMRK MLSVSAPSMP SSGGGRRSTE PLELEECSKD LLEVFQINAP
101: SMAGGIPAYS VEFTNTCMEC LVCDVHVACG DFASNDVIDP TKFRRLGFND CLVNGGLSIE PSFPVSFQYG NSFPYPMTVS SASCHRN
101: SMAGGIPAYS VEFTNTCMEC LVCDVHVACG DFASNDVIDP TKFRRLGFND CLVNGGLSIE PSFPVSFQYG NSFPYPMTVS SASCHRN
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.