CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014205_P001	Maize	extracellular	66.67	68.64
Zm00001d033019_P001	Maize	extracellular	59.2	57.87
Os10t0207500-01	Rice	extracellular	44.25	45.56
TraesCS4D01G104500.2	Wheat	vacuole	37.93	40.0
HORVU0Hr1G036340.1	Barley	extracellular, golgi	38.51	39.65
HORVU4Hr1G016460.1	Barley	extracellular, golgi	38.51	39.65
TraesCS4A01G203700.1	Wheat	extracellular	38.51	39.65
TraesCS4B01G107400.2	Wheat	endoplasmic reticulum, extracellular, vacuole	37.36	37.36
OQU86773	Sorghum	extracellular	37.93	37.08
HORVU4Hr1G016500.2	Barley	extracellular, vacuole	35.63	36.05
TraesCS4D01G104300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	34.48	34.48
TraesCS4A01G203500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.91	33.91
KXG32362	Sorghum	extracellular	33.91	33.71
TraesCS4B01G075800.1	Wheat	plastid	34.48	32.09
OQU79047	Sorghum	plastid	31.03	24.88

Protein Annotations

EnsemblPlants:KXG38580	EnsemblPlantsGene:SORBI_3001G254700	PANTHER:PTHR33184	PANTHER:PTHR33184:SF25	ProteinID:KXG38580	ProteinID:KXG38580.1
SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00081AB793	UniProt:A0A1B6QKY1	MapMan:11.10.1.7.1

Description

hypothetical protein

Coordinates

chr1:+:28682631..28683824

Molecular Weight (calculated)

18261.5 Da

IEP (calculated)

5.070

GRAVY (calculated)

0.198

Length

174 amino acids

Sequence
(BLAST)

001: MEQWCFKKRA ALVIVVVITS LLLLTIAQAA ASGHQHPSSW STLNKARKLL LNTTGGDDDE VSSSLPAGGV VSDGCSGEDV VVYQSSANPL PSGIPAYTVQ
101: IINVCSGGCT VYDVHVSCGD FASTELVDPA KFQRVSFNDC VVKGGGALEP SETVSFQYSN SFSYHLTVAS VACH

Best Arabidopsis Sequence Match ( AT1G32583.1 )
(BLAST)

001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF

Arabidopsis Description

TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.