Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU86773 | Sorghum | extracellular | 76.57 | 75.28 |
| Zm00001d000032_P001 | Maize | cytosol | 48.57 | 72.03 |
| Zm00001d040600_P001 | Maize | extracellular, plastid | 61.71 | 62.07 |
| KXG38580 | Sorghum | extracellular | 33.71 | 33.91 |
| OQU79047 | Sorghum | plastid | 28.57 | 23.04 |
Protein Annotations
| EnsemblPlants:KXG32362 | EnsemblPlantsGene:SORBI_3003G143500 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | ProteinID:KXG32362 | ProteinID:KXG32362.1 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00081AB267 | UniProt:A0A1B6Q378 | MapMan:11.10.1.7.1 |
Description
hypothetical protein
Coordinates
chr3:-:14251876..14252666
Molecular Weight (calculated)
18537.2 Da
IEP (calculated)
6.734
GRAVY (calculated)
0.220
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCPRPREGY AVAIVFMALL FLLSRQAGVV VKPTVAVKHQ AVHVRRLLNN DARAGGGNSR GGAAAVTFAA SVDLCSEEVV EVSQGNAGSL PNGVPSYSVT
101: ITNTCLDCTV RDVHVSCGEF ATTELVDPSY FRRLSYGDCL VRNGGPIGPG EIISFDYSNS FIYKMEVATV SCVNI
101: ITNTCLDCTV RDVHVSCGEF ATTELVDPSY FRRLSYGDCL VRNGGPIGPG EIISFDYSNS FIYKMEVATV SCVNI
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.