Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32362 | Sorghum | extracellular | 75.28 | 76.57 |
| Zm00001d000032_P001 | Maize | cytosol | 48.31 | 72.88 |
| Zm00001d040600_P001 | Maize | extracellular, plastid | 58.43 | 59.77 |
| KXG38580 | Sorghum | extracellular | 37.08 | 37.93 |
| OQU79047 | Sorghum | plastid | 32.02 | 26.27 |
Protein Annotations
| EnsemblPlants:OQU86773 | EnsemblPlantsGene:SORBI_3003G143401 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | PFscan:PS51257 | ProteinID:OQU86773 |
| ProteinID:OQU86773.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0009DC92A7 | UniProt:A0A1W0VXC9 |
| MapMan:11.10.1.7.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:14228779..14230027
Molecular Weight (calculated)
18581.1 Da
IEP (calculated)
5.141
GRAVY (calculated)
0.263
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCPRPREGS AVAIVFMALL FLLSGQAGVV SCHPPPTVAV KYQAVHVRKL LNNDARAAGG NSRGGAAAVA FAASADLCSE EVVEVSQGSA GSLPNGVPFY
101: SVTITNTCLD CTVRDVHVSC GEFASTELVD PSDFRRLSYG DCLVRNGGPI GPGEIISFDY SNSFIYKMEV ATVSCVNI
101: SVTITNTCLD CTVRDVHVSC GEFASTELVD PSDFRRLSYG DCLVRNGGPI GPGEIISFDY SNSFIYKMEV ATVSCVNI
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.