Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040600_P001 | Maize | extracellular, plastid | 73.73 | 50.0 |
| KXG32362 | Sorghum | extracellular | 72.03 | 48.57 |
| OQU86773 | Sorghum | extracellular | 72.88 | 48.31 |
| Zm00001d033019_P001 | Maize | extracellular | 52.54 | 34.83 |
| Zm00001d014205_P001 | Maize | extracellular | 49.15 | 34.32 |
| Zm00001d023681_P001 | Maize | extracellular | 39.83 | 21.96 |
Protein Annotations
| EnsemblPlants:Zm00001d000032_P001 | EnsemblPlants:Zm00001d000032_T001 | EnsemblPlantsGene:Zm00001d000032 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | UniParc:UPI000843861A |
| UniProt:A0A1X7YE63 | MapMan:11.10.1.7.1 | : | : | : | : |
Description
Protein TAPETUM DETERMINANT 1
Coordinates
chrB73V4_ctg182:+:259037..259393
Molecular Weight (calculated)
12247.2 Da
IEP (calculated)
3.969
GRAVY (calculated)
-0.015
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAYGAEKTE EAAPPDLCSG VVAVSQGSAG SLSNGTPSYS VTITNTCLGC TVRDVHVSCG EFAAPTELVD PSDFRRLSYD DCLVKNGGPM GPGETISFEY
101: SNSFIYKMDV ATVSCGDV
101: SNSFIYKMDV ATVSCGDV
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.