Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G104300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 95.98 | 95.98 |
| TraesCS4B01G075800.1 | Wheat | plastid | 89.08 | 82.89 |
| HORVU4Hr1G016500.2 | Barley | extracellular, vacuole | 68.39 | 69.19 |
| TraesCS4A01G203700.1 | Wheat | extracellular | 66.09 | 68.05 |
| Os10t0207500-01 | Rice | extracellular | 33.91 | 34.91 |
| KXG38580 | Sorghum | extracellular | 33.91 | 33.91 |
| Zm00001d014205_P001 | Maize | extracellular | 32.76 | 33.73 |
| Zm00001d033019_P001 | Maize | extracellular | 32.18 | 31.46 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 30.46 | 28.49 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 28.74 | 22.73 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G203500.1 | EnsemblPlantsGene:TraesCS4A01G203500 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | PFscan:PS51257 | SEG:seg |
| SignalP:SignalP-noTM | MapMan:11.10.1.7.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:494044874..494045656
Molecular Weight (calculated)
18491.0 Da
IEP (calculated)
4.406
GRAVY (calculated)
0.118
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MACFQTRPSA AVVVVVAVLL LQACYEGSQA SASSSLQLQL PRHQMRKMLS ASAPSMSSSG GGGRSAEPLE LEECSKDLLE VYQINAPSMA GGIPTYSVEF
101: TNTCIECLVC DVHVACGDFA SNDVIDPAKF RRLAINDCLV NDGKSIEPSF PVSFQYGNSF PYPMTVASAS CDCN
101: TNTCIECLVC DVHVACGDFA SNDVIDPAKF RRLAINDCLV NDGKSIEPSF PVSFQYGNSF PYPMTVASAS CDCN
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.