Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G036340.1 | Barley | extracellular, golgi | 72.09 | 73.37 |
| HORVU4Hr1G016460.1 | Barley | extracellular, golgi | 72.09 | 73.37 |
| TraesCS4B01G107400.2 | Wheat | endoplasmic reticulum, extracellular, vacuole | 72.67 | 71.84 |
| TraesCS4D01G104300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 70.35 | 69.54 |
| TraesCS4A01G203500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 69.19 | 68.39 |
| TraesCS4B01G075800.1 | Wheat | plastid | 68.6 | 63.1 |
| Os10t0207500-01 | Rice | extracellular | 35.47 | 36.09 |
| KXG38580 | Sorghum | extracellular | 36.05 | 35.63 |
| Zm00001d033019_P001 | Maize | extracellular | 36.63 | 35.39 |
| Zm00001d014205_P001 | Maize | extracellular | 33.14 | 33.73 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 15.12 | 30.95 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 25.58 | 27.85 |
Protein Annotations
| EMBL:AK373045 | EnsemblPlants:HORVU4Hr1G016500.2 | EnsemblPlantsGene:HORVU4Hr1G016500 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | PFscan:PS51257 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0002008288 | UniProt:F2EA70 | MapMan:11.10.1.7.1 | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EA70]
Coordinates
chrchr4H:-:68389161..68390101
Molecular Weight (calculated)
18113.5 Da
IEP (calculated)
5.058
GRAVY (calculated)
0.110
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MARLHTHPSA AVVVVVTMLL LQACSEGSQA SASSSQRLPL HQMRKMLSVN APSMSSSGGG GHSVEPLELE ECSQDLLEVS QINAPSMAGG IPAYSVSITN
101: TCTDCLVCDV HIACGDFASN DVIDPAKFRR LGFNDCLVND GRSIDPSFPV SFHYGNSFPY PMTVASASCA CN
101: TCTDCLVCDV HIACGDFASN DVIDPAKFRR LGFNDCLVND GRSIDPSFPV SFHYGNSFPY PMTVASASCA CN
001: MNRRRLLVSA TLLSYLLYGM ALVSVEASGG EKLRDNLDLT KTTTSSPSIS HRKMLLLSPG TGKTERSVEP ERIGEKCKST DIVVNQAVTE PMPNGIPGYM
101: VEITNQCMSG CIISRIHINC GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA
101: VEITNQCMSG CIISRIHINC GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA
Arabidopsis Description
TPD1TPD1 [Source:UniProtKB/TrEMBL;Acc:A0A178V0R1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.