Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G203500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 95.98 | 95.98 |
| TraesCS4B01G075800.1 | Wheat | plastid | 91.95 | 85.56 |
| HORVU4Hr1G016500.2 | Barley | extracellular, vacuole | 69.54 | 70.35 |
| TraesCS4D01G104500.2 | Wheat | vacuole | 62.64 | 66.06 |
| Os10t0207500-01 | Rice | extracellular | 33.91 | 34.91 |
| KXG38580 | Sorghum | extracellular | 34.48 | 34.48 |
| Zm00001d014205_P001 | Maize | extracellular | 32.76 | 33.73 |
| Zm00001d033019_P001 | Maize | extracellular | 33.33 | 32.58 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 28.74 | 26.88 |
| TraesCS1D01G119800.1 | Wheat | plastid | 28.16 | 22.27 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G104300.1 | EnsemblPlantsGene:TraesCS4D01G104300 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF25 | PFscan:PS51257 | SEG:seg |
| SignalP:SignalP-noTM | MapMan:11.10.1.7.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:82738259..82739051
Molecular Weight (calculated)
18569.2 Da
IEP (calculated)
4.536
GRAVY (calculated)
0.089
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MACFQTRPSA AVVVVVTMLL LQACYEGSQA SASSSLQLQL PRHQMRKMLS VSAPSMSSSG GGGRSAEPLE LEECSKDLLE VYQINAPSMA GGIPAYSVEF
101: TNTCMECLVC DVHVACGDFA SNDVIDPAKF RRLGINDCLV NDGKSIEPSF PVSFQYGNSF PYPMTVASAS CDCK
101: TNTCMECLVC DVHVACGDFA SNDVIDPAKF RRLGINDCLV NDGKSIEPSF PVSFQYGNSF PYPMTVASAS CDCK
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.