CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081204	Potato	cytosol	46.5	68.89
KRH54147	Soybean	plasma membrane	55.5	62.36
KRH41105	Soybean	cytosol	33.5	56.78
GSMUA_Achr9P01220_001	Banana	cytosol	30.5	56.48
Solyc03g097530.2.1	Tomato	extracellular, plasma membrane	48.5	55.11
GSMUA_Achr6P06090_001	Banana	plastid	18.0	53.73
TraesCS2A01G082300.1	Wheat	extracellular	33.0	35.48
HORVU1Hr1G026400.6	Barley	mitochondrion	28.0	35.44
TraesCS2D01G080200.1	Wheat	extracellular	31.5	33.87
TraesCS2B01G096400.1	Wheat	extracellular	30.5	32.8
KRH11947	Soybean	endoplasmic reticulum, extracellular, vacuole	27.0	32.14
KRH12643	Soybean	endoplasmic reticulum, extracellular, vacuole	26.0	31.33
TraesCS1A01G118900.1	Wheat	endoplasmic reticulum, plastid	32.0	29.09
TraesCS1D01G119800.1	Wheat	plastid	32.0	29.09
TraesCS1B01G138400.1	Wheat	endoplasmic reticulum, plastid	32.0	28.83
HORVU7Hr1G058610.2	Barley	cytosol	12.0	28.57
Zm00001d023681_P001	Maize	extracellular	29.5	27.57
Os12t0472500-01	Rice	plasma membrane	31.0	27.43
OQU79047	Sorghum	plastid	29.5	27.19

Protein Annotations

EMBL:ACUP02002712	EnsemblPlants:KRH63800	EnsemblPlantsGene:GLYMA_04G198200	EntrezGene:100790055	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33184	PANTHER:PTHR33184:SF2	ProteinID:KRH63800	ProteinID:KRH63800.1	ProteinID:KRH63801.1
ProteinID:KRH63802.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0003DE9092	UniProt:A0A0R0KF90	MapMan:11.10.1.7.1

Description

hypothetical protein

Coordinates

chr4:+:47039837..47042915

Molecular Weight (calculated)

21692.1 Da

IEP (calculated)

8.124

GRAVY (calculated)

0.027

Length

200 amino acids

Sequence
(BLAST)

001: MEAPSVRRIA VVVFVTVSVF SIALVAVLTD FGGGGGGTLT DTMAAVSLSR GLDEVTNTFL PNSHRKLLTS GNGNERVEPN RIWGEKCSKS DVVINQGPTA
101: PLPSGIPTYT VEIMNMCVSG CDISGIHLRC GWFSSARLIN PKLFKRLRYN DCLVNDGRPL INGATISFQY MNMWASITCA RDGNEDANGN GNVFLHFFNR

Best Arabidopsis Sequence Match ( AT4G24972.1 )
(BLAST)

001: MNRRRLLVSA TLLSYLLYGM ALVSVEASGG EKLRDNLDLT KTTTSSPSIS HRKMLLLSPG TGKTERSVEP ERIGEKCKST DIVVNQAVTE PMPNGIPGYM
101: VEITNQCMSG CIISRIHINC GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA

Arabidopsis Description

TPD1TPD1 [Source:UniProtKB/TrEMBL;Acc:A0A178V0R1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.