Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24972.1 | KRG91463 | AT5G07280.1 | 18250314 |
| AT4G24972.1 | KRH35354 | AT5G07280.1 | 18250314 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P01220_001 | Banana | cytosol | 50.0 | 54.63 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 28.81 | 50.75 |
| KRH54147 | Soybean | plasma membrane | 64.41 | 42.7 |
| Bra013852.1-P | Field mustard | golgi, plasma membrane | 50.85 | 35.09 |
| CDY34331 | Canola | plasma membrane | 50.85 | 34.88 |
| KRH63800 | Soybean | extracellular | 56.78 | 33.5 |
| AT4G24972.1 | Thale cress | plasma membrane | 49.15 | 32.95 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 44.07 | 32.91 |
| KRH11947 | Soybean | endoplasmic reticulum, extracellular, vacuole | 42.37 | 29.76 |
| KRH12643 | Soybean | endoplasmic reticulum, extracellular, vacuole | 41.53 | 29.52 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 44.92 | 28.49 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 42.37 | 26.88 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 41.53 | 26.34 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 18.64 | 26.19 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 40.68 | 21.82 |
| TraesCS1D01G119800.1 | Wheat | plastid | 40.68 | 21.82 |
| Os12t0472500-01 | Rice | plasma membrane | 41.53 | 21.68 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 40.68 | 21.62 |
| CDY03399 | Canola | extracellular, golgi | 50.85 | 21.35 |
| OQU79047 | Sorghum | plastid | 38.98 | 21.2 |
| Zm00001d023681_P001 | Maize | extracellular | 38.14 | 21.03 |
Protein Annotations
| EMBL:ACUP02004750 | EnsemblPlants:KRH41105 | EnsemblPlantsGene:GLYMA_08G010200 | GO:GO:0000003 | GO:GO:0001709 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0048653 |
| PANTHER:PTHR33184 | PANTHER:PTHR33184:SF2 | ProteinID:KRH41105 | ProteinID:KRH41105.1 | UniParc:UPI00054A5679 | UniProt:A0A0R0IF93 |
| MapMan:11.10.1.7.1 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:805866..806222
Molecular Weight (calculated)
12999.7 Da
IEP (calculated)
8.697
GRAVY (calculated)
-0.097
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MCEAEAEGSR RGKRVEEKCS KSVIQINQSP TERLPSGIPT YTVEIANTCV SGCNISEIHV ACGMFSSSRL INPKIFKRLL YNDCLVNDGK RFRNGAIISF
101: KYATTFPFPL SVSSLLCG
101: KYATTFPFPL SVSSLLCG
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.