Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 8
- golgi 5
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400081204 | Potato | cytosol | 57.3 | 75.56 |
| GSMUA_Achr9P01220_001 | Banana | cytosol | 39.89 | 65.74 |
| KRH41105 | Soybean | cytosol | 42.7 | 64.41 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 23.6 | 62.69 |
| Solyc03g097530.2.1 | Tomato | extracellular, plasma membrane | 60.11 | 60.8 |
| KRH63800 | Soybean | extracellular | 62.36 | 55.5 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 38.76 | 37.1 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 32.02 | 36.08 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 37.08 | 35.48 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 37.08 | 35.48 |
| KRH11947 | Soybean | endoplasmic reticulum, extracellular, vacuole | 33.15 | 35.12 |
| KRH12643 | Soybean | endoplasmic reticulum, extracellular, vacuole | 32.02 | 34.34 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 15.17 | 32.14 |
| Zm00001d023681_P001 | Maize | extracellular | 38.2 | 31.78 |
| TraesCS1D01G119800.1 | Wheat | plastid | 38.76 | 31.36 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 38.2 | 30.91 |
| OQU79047 | Sorghum | plastid | 37.64 | 30.88 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 38.2 | 30.63 |
| Os12t0472500-01 | Rice | plasma membrane | 38.2 | 30.09 |
Protein Annotations
| EMBL:ACUP02003499 | EnsemblPlants:KRH54147 | EnsemblPlantsGene:GLYMA_06G167300 | EntrezGene:100792919 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF2 |
| ProteinID:KRH54144.1 | ProteinID:KRH54145.1 | ProteinID:KRH54146.1 | ProteinID:KRH54147 | ProteinID:KRH54147.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00023384AE | UniProt:K7KVI3 | MapMan:11.10.1.7.1 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:13966922..13970213
Molecular Weight (calculated)
19314.6 Da
IEP (calculated)
9.638
GRAVY (calculated)
0.190
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPRSVRRIV VFVTITVFSL ALLAVLTGFG GGGTLTVAMA VSVTRGSEKG TVASSHRKLL TSDNGNERVE PNRIWGEKCS KSDIVINQGP TAPLPSGIPT
101: YTVEIMNMCV SGCDISKIHL RCGWFSSARL INPKLFKRLR YNDCLVNDGR PLINGATISF QYANTFLYPL SVSSVVCV
101: YTVEIMNMCV SGCDISKIHL RCGWFSSARL INPKLFKRLR YNDCLVNDGR PLINGATISF QYANTFLYPL SVSSVVCV
001: MNRRRLLVSA TLLSYLLYGM ALVSVEASGG EKLRDNLDLT KTTTSSPSIS HRKMLLLSPG TGKTERSVEP ERIGEKCKST DIVVNQAVTE PMPNGIPGYM
101: VEITNQCMSG CIISRIHINC GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA
101: VEITNQCMSG CIISRIHINC GWFSSAKLIN PRVFKRIHYD DCLVNNGKPL PFGSTLSFHY ANTFPYHLSV AFVTCA
Arabidopsis Description
TPD1TPD1 [Source:UniProtKB/TrEMBL;Acc:A0A178V0R1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.