Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g012650.1.1 | Tomato | extracellular | 71.0 | 69.61 |
| GSMUA_Achr9P01220_001 | Banana | cytosol | 32.0 | 59.26 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 19.5 | 58.21 |
| PGSC0003DMT400081204 | Potato | cytosol | 34.5 | 51.11 |
| PGSC0003DMT400092903 | Potato | cytosol | 34.5 | 51.11 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 27.0 | 34.18 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 13.5 | 32.14 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 28.0 | 30.11 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 27.5 | 29.57 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 26.5 | 28.49 |
| OQU79047 | Sorghum | plastid | 29.5 | 27.19 |
| Zm00001d023681_P001 | Maize | extracellular | 29.0 | 27.1 |
| Os12t0472500-01 | Rice | plasma membrane | 29.5 | 26.11 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 28.5 | 25.91 |
| TraesCS1D01G119800.1 | Wheat | plastid | 28.5 | 25.91 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 28.5 | 25.68 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400034771 | EnsemblPlantsGene:PGSC0003DMG400013361 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF2 | PGSC:PGSC0003DMG400013361 | SEG:seg |
| UniParc:UPI0002952C27 | UniProt:M1B195 | MapMan:11.10.1.7.1 | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400013361]
Coordinates
chr11:+:299818..301715
Molecular Weight (calculated)
20824.2 Da
IEP (calculated)
5.971
GRAVY (calculated)
-0.222
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGHYSHSL VTGKFVHINN ALELAHEKNG AGLNYTVNPA RKLLQLPDIG EGDGIGYIGD GNDNDGNVGG DDGTGGFVGN GGDGNSTGGD GSENRIGEGT
101: CSNKFIQVNQ GPSASLPSGI PTYTVIVLNA CFSGSCSISN IHLSCGWFSS ARLINPKIFR RLNYNDCLVN DGQPLTAGQS LTFSYANTFP YKLAVSSIVC
101: CSNKFIQVNQ GPSASLPSGI PTYTVIVLNA CFSGSCSISN IHLSCGWFSS ARLINPKIFR RLNYNDCLVN DGQPLTAGQS LTFSYANTFP YKLAVSSIVC
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.