Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034771 | Potato | cytosol | 69.61 | 71.0 |
| GSMUA_Achr9P01220_001 | Banana | cytosol | 31.86 | 60.19 |
| GSMUA_Achr6P06090_001 | Banana | plastid | 19.12 | 58.21 |
| Solyc11g006850.1.1 | Tomato | extracellular | 32.84 | 49.63 |
| Solyc03g097530.2.1 | Tomato | extracellular, plasma membrane | 35.78 | 41.48 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 27.94 | 36.08 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 13.73 | 33.33 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 26.96 | 29.57 |
| Os12t0472500-01 | Rice | plasma membrane | 32.35 | 29.2 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 31.37 | 29.09 |
| TraesCS1D01G119800.1 | Wheat | plastid | 31.37 | 29.09 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 26.47 | 29.03 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 31.37 | 28.83 |
| OQU79047 | Sorghum | plastid | 30.39 | 28.57 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 25.98 | 28.49 |
| Zm00001d023681_P001 | Maize | extracellular | 29.41 | 28.04 |
Protein Annotations
| EnsemblPlants:Solyc11g012650.1.1 | EnsemblPlantsGene:Solyc11g012650.1 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF2 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000276A100 | UniProt:K4D669 | MapMan:11.10.1.7.1 | : | : |
Description
No Description!
Coordinates
chr11:-:5424760..5426139
Molecular Weight (calculated)
21309.9 Da
IEP (calculated)
4.266
GRAVY (calculated)
0.058
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMKSFFIFS VVLLLVSFSV IHINHANGAD FINYIVNPAR KLLDLPDIGD DAGDGIGNIG DGNFFGGGDG DGTGGFIGNV GDGNGGDGNS TGGDGSENRI
101: GEGTCSNNFI QVNQGPSASL PSGIPTYTVI VLNACYSGSC SISNIHLSCG WFSSARLINP RIFRRLNYND CLVNDGQPLA AGESLTFSYA NTYPYKLAVS
201: SIVC
101: GEGTCSNNFI QVNQGPSASL PSGIPTYTVI VLNACYSGSC SISNIHLSCG WFSSARLINP RIFRRLNYND CLVNDGQPLA AGESLTFSYA NTYPYKLAVS
201: SIVC
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.