CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01257	Canola	cytosol, extracellular, plastid	98.41	46.27
CDX84078	Canola	cytosol, extracellular, mitochondrion, plastid	57.14	39.13
GSMUA_AchrUn_...	Banana	cytosol	63.49	37.04
HORVU7Hr1G058610.2	Barley	cytosol	47.62	35.71
GSMUA_Achr8P26310_001	Banana	cytosol	63.49	32.26
CDX73256	Canola	extracellular	88.89	31.82
CDY26905	Canola	extracellular	88.89	31.82
AT1G32583.1	Thale cress	extracellular	84.13	29.61
VIT_00s0194g00170.t01	Wine grape	extracellular	65.08	23.56
HORVU1Hr1G026400.6	Barley	mitochondrion	58.73	23.42
CDY34331	Canola	plasma membrane	60.32	22.09
TraesCS2A01G082300.1	Wheat	extracellular	55.56	18.82
TraesCS2B01G096400.1	Wheat	extracellular	55.56	18.82
TraesCS2D01G080200.1	Wheat	extracellular	53.97	18.28
OQU79047	Sorghum	plastid	58.73	17.05
Zm00001d023681_P001	Maize	extracellular	57.14	16.82
TraesCS1A01G118900.1	Wheat	endoplasmic reticulum, plastid	58.73	16.82
TraesCS1D01G119800.1	Wheat	plastid	58.73	16.82
Os12t0472500-01	Rice	plasma membrane	60.32	16.81
TraesCS1B01G138400.1	Wheat	endoplasmic reticulum, plastid	58.73	16.67
CDY03399	Canola	extracellular, golgi	61.9	13.88

Protein Annotations

EnsemblPlants:CDY01265	EnsemblPlantsGene:GSBRNA2T00111440001	PANTHER:PTHR33184	PANTHER:PTHR33184:SF26	ProteinID:CDY01265	ProteinID:CDY01265.1
SEG:seg	UniParc:UPI0004EF41DB	MapMan:11.10.1.7.1	:	:	:

Description

BnaC05g24670D

Coordinates

chrLK031925:-:827134..827325

Molecular Weight (calculated)

7118.5 Da

IEP (calculated)

8.482

GRAVY (calculated)

0.230

Length

63 amino acids

Sequence
(BLAST)

1: MEINVTCGWF SSVRLVNPRV FRRLSYYDCL VKDGQPLAPG QTLSFLYANS FSYPLSVSSV SCF

Best Arabidopsis Sequence Match ( AT1G32583.1 )
(BLAST)

001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF

Arabidopsis Description

TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.