Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01265 | Canola | extracellular | 39.13 | 57.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.13 | 33.33 |
| CDY26905 | Canola | extracellular | 63.04 | 32.95 |
| GSMUA_Achr8P26310_001 | Banana | cytosol | 43.48 | 32.26 |
| CDY01257 | Canola | cytosol, extracellular, plastid | 46.74 | 32.09 |
| CDX73256 | Canola | extracellular | 60.87 | 31.82 |
| AT1G32583.1 | Thale cress | extracellular | 59.78 | 30.73 |
| CDY34331 | Canola | plasma membrane | 47.83 | 25.58 |
| VIT_00s0194g00170.t01 | Wine grape | extracellular | 46.74 | 24.71 |
| HORVU1Hr1G026400.6 | Barley | mitochondrion | 39.13 | 22.78 |
| HORVU7Hr1G058610.2 | Barley | cytosol | 20.65 | 22.62 |
| TraesCS2A01G082300.1 | Wheat | extracellular | 41.3 | 20.43 |
| TraesCS2B01G096400.1 | Wheat | extracellular | 39.13 | 19.35 |
| TraesCS2D01G080200.1 | Wheat | extracellular | 39.13 | 19.35 |
| TraesCS1A01G118900.1 | Wheat | endoplasmic reticulum, plastid | 40.22 | 16.82 |
| TraesCS1D01G119800.1 | Wheat | plastid | 40.22 | 16.82 |
| TraesCS1B01G138400.1 | Wheat | endoplasmic reticulum, plastid | 40.22 | 16.67 |
| OQU79047 | Sorghum | plastid | 39.13 | 16.59 |
| Os12t0472500-01 | Rice | plasma membrane | 40.22 | 16.37 |
| Zm00001d023681_P001 | Maize | extracellular | 35.87 | 15.42 |
| CDY03399 | Canola | extracellular, golgi | 45.65 | 14.95 |
Protein Annotations
| EnsemblPlants:CDX84078 | EnsemblPlantsGene:GSBRNA2T00139974001 | PANTHER:PTHR33184 | PANTHER:PTHR33184:SF26 | ProteinID:CDX84078 | ProteinID:CDX84078.1 |
| UniParc:UPI0004EDD4FD | MapMan:11.10.1.7.1 | : | : | : | : |
Description
BnaC08g07550D
Coordinates
chrLK031835:+:690581..691676
Molecular Weight (calculated)
10362.5 Da
IEP (calculated)
8.211
GRAVY (calculated)
-0.001
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MSLWRFKMLI KYSQGLSVSI DDGNNRIGQD CSKDNIVIFN ACVSDCRIAE IHVSCGWFSS VRMVNPRVFR RISYGDCLVN DGQPLAPGQT LF
001: MRMEHIYKFQ HWLFFIGLGV LLSLSLSVKA NDFEGSNDRR SIALKARSFV SINENRTALS RKLLLSPDIG DGTNRIGQDC SKDDIVLFQG STNPLPSGVP
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
101: SYTVEIFNSC VSDCNIAEIH VSCGWFSSVR LVNPRVFRRL DYDDCLVNDG QPLGPGQSLS FQYANSFSYP LSVASVSCF
Arabidopsis Description
TDL1TPD1 protein homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q1G3T1]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.