Factsheet for TraesCS3D01G418600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
plasma membrane 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G118900.1
TraesCS1B01G138400.1
TraesCS1D01G119800.1
TraesCS2A01G082300.1
TraesCS2B01G096400.1
TraesCS2D01G080200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07280.1	TraesCS1A01G118900.1	AT4G24972.1	18250314
AT5G07280.1	TraesCS1B01G138400.1	AT4G24972.1	18250314
AT5G07280.1	TraesCS1D01G119800.1	AT4G24972.1	18250314
AT5G07280.1	TraesCS2A01G082300.1	AT4G24972.1	18250314
AT5G07280.1	TraesCS2B01G096400.1	AT4G24972.1	18250314
AT5G07280.1	TraesCS2D01G080200.1	AT4G24972.1	18250314

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G458900.1	Wheat	plasma membrane	97.77	40.23
TraesCS2D01G297600.2	Wheat	plasma membrane	93.69	40.21
TraesCS3D01G311500.1	Wheat	plasma membrane	97.59	40.12
TraesCS2D01G034200.1	Wheat	plasma membrane	96.29	39.59
HORVU3Hr1G093530.7	Barley	plasma membrane	94.62	38.81
Os01t0917500-01	Rice	plasma membrane	82.93	34.54
EES01957	Sorghum	plasma membrane	78.85	32.87
Zm00001d042362_P001	Maize	plasma membrane	77.92	31.84
GSMUA_Achr8P00900_001	Banana	plasma membrane	57.14	30.65
CDX70023	Canola	plasma membrane	44.53	28.71
TraesCS6D01G154800.2	Wheat	mitochondrion, nucleus, plasma membrane, plastid	68.83	27.85
GSMUA_Achr5P25270_001	Banana	plasma membrane	41.19	26.27
PGSC0003DMT400055685	Potato	cytosol, plasma membrane, plastid	58.63	25.57
VIT_05s0062g01100.t01	Wine grape	plasma membrane	59.37	24.79
Solyc09g098420.1.1	Tomato	plasma membrane	58.26	24.72
CDX98990	Canola	plasma membrane	41.19	23.97
Bra009277.1-P	Field mustard	plasma membrane	45.27	19.79
AT5G07280.1	Thale cress	plasma membrane	43.23	19.55
KRG91463	Soybean	plasma membrane	45.08	19.16
Zm00001d012048_P001	Maize	plasma membrane	31.35	19.12
KRH35354	Soybean	plasma membrane	44.71	18.99
TraesCS3D01G246500.1	Wheat	plasma membrane	36.92	17.7
TraesCS5D01G181500.1	Wheat	plasma membrane	39.15	17.44
TraesCS3D01G099700.1	Wheat	plasma membrane	37.48	17.37
TraesCS2D01G190200.2	Wheat	plasma membrane	28.94	14.05
TraesCS2D01G053000.1	Wheat	plasma membrane	24.12	12.9
TraesCS3D01G496100.1	Wheat	plasma membrane	25.79	12.85
TraesCS7D01G424900.1	Wheat	plasma membrane	7.61	5.44

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	PFAM:PF07714	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF163	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3D01G418600	EnsemblPlants:TraesCS3D01G418600.1	TIGR:cd14066	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:+:531351152..531352771

Molecular Weight (calculated)

59091.3 Da

IEP (calculated)

7.515

GRAVY (calculated)

0.034

Length

539 amino acids

Sequence
(BLAST)

001: MYVLTGSLPQ SLLCNKYLNR LDVSNNNLSG KILFFCPMDG ESSSSLLSFN SSSNRFSGTL DESISNFTQL SSLDIHNNSL TGSLPSALSD LSFLNYLDLS
101: SNDFYGVIPC GICNIFGLTF ANFSGNHIDM FSSSDYAAGG VCSTNGTGRR VAHPSHRVRR LGIICILSLA VIIVLVLLLF YLRHKLSRNS SLVIVPAGKA
201: KATVEPTSSD ELLGRKSREP LSINLATFQH SLLRVTTDDI LKATKNFSKE HIIGDGGFGT VYRAALPEGR RVAIKRLHGG HQFQGDREFL AEMETIGKVK
301: HPNLVPLLGY CVCGDERFLI YEYMENGSLE IWLRNRADAV EALGWPDRLK ICLGSAHGLA FLHEGFVPHI IHRDMKSSNI LLDVNFEPRV SDFGLARIIS
401: ACETHVSTDI AGTFGYIPLE YGQTMKSSTK GDVYSFGVVM LELLTGRPPT GQEDLEGGGN LVGWVRWVIA RGTRNKLFDP CLPVSGVWRE QMVRVLGIAL
501: DCTADEPWKR PSMVEVVKGL KTTQAMECGP LVVTVSRGA

Best Arabidopsis Sequence Match ( AT1G55610.1 )
(BLAST)

0001: MKQRWLLVLI LCFFTTSLVM GIHGKHLIND DFNETALLLA FKQNSVKSDP NNVLGNWKYE SGRGSCSWRG VSCSDDGRIV GLDLRNSGLT GTLNLVNLTA
0101: LPNLQNLYLQ GNYFSSGGDS SGSDCYLQVL DLSSNSISDY SMVDYVFSKC SNLVSVNISN NKLVGKLGFA PSSLQSLTTV DLSYNILSDK IPESFISDFP
0201: ASLKYLDLTH NNLSGDFSDL SFGICGNLTF FSLSQNNLSG DKFPITLPNC KFLETLNISR NNLAGKIPNG EYWGSFQNLK QLSLAHNRLS GEIPPELSLL
0301: CKTLVILDLS GNTFSGELPS QFTACVWLQN LNLGNNYLSG DFLNTVVSKI TGITYLYVAY NNISGSVPIS LTNCSNLRVL DLSSNGFTGN VPSGFCSLQS
0401: SPVLEKILIA NNYLSGTVPM ELGKCKSLKT IDLSFNELTG PIPKEIWMLP NLSDLVMWAN NLTGTIPEGV CVKGGNLETL ILNNNLLTGS IPESISRCTN
0501: MIWISLSSNR LTGKIPSGIG NLSKLAILQL GNNSLSGNVP RQLGNCKSLI WLDLNSNNLT GDLPGELASQ AGLVMPGSVS GKQFAFVRNE GGTDCRGAGG
0601: LVEFEGIRAE RLERLPMVHS CPATRIYSGM TMYTFSANGS MIYFDISYNA VSGFIPPGYG NMGYLQVLNL GHNRITGTIP DSFGGLKAIG VLDLSHNNLQ
0701: GYLPGSLGSL SFLSDLDVSN NNLTGPIPFG GQLTTFPVSR YANNSGLCGV PLRPCGSAPR RPITSRIHAK KQTVATAVIA GIAFSFMCFV MLVMALYRVR
0801: KVQKKEQKRE KYIESLPTSG SCSWKLSSVP EPLSINVATF EKPLRKLTFA HLLEATNGFS AETMVGSGGF GEVYKAQLRD GSVVAIKKLI RITGQGDREF
0901: MAEMETIGKI KHRNLVPLLG YCKVGEERLL VYEYMKWGSL ETVLHEKSSK KGGIYLNWAA RKKIAIGAAR GLAFLHHSCI PHIIHRDMKS SNVLLDEDFE
1001: ARVSDFGMAR LVSALDTHLS VSTLAGTPGY VPPEYYQSFR CTAKGDVYSY GVILLELLSG KKPIDPGEFG EDNNLVGWAK QLYREKRGAE ILDPELVTDK
1101: SGDVELFHYL KIASQCLDDR PFKRPTMIQL MAMFKEMKAD TEEDESLDEF SLKETPLVEE SRDKEP

Arabidopsis Description

BRL1Serine/threonine-protein kinase BRI1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWC8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.