Factsheet for GSMUA_Achr5P25270_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
plasma membrane 5
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr6P06090_001
GSMUA_Achr9P01220_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07280.1	GSMUA_Achr6P06090_001	AT4G24972.1	18250314
AT5G07280.1	GSMUA_Achr9P01220_001	AT4G24972.1	18250314

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P00900_001	Banana	plasma membrane	69.35	58.31
TraesCS3D01G418600.1	Wheat	plasma membrane, plastid	26.27	41.19
Os01t0917500-01	Rice	plasma membrane	59.41	38.79
EES01957	Sorghum	plasma membrane	59.17	38.67
TraesCS2D01G297600.2	Wheat	plasma membrane	57.28	38.53
TraesCS3A01G423400.1	Wheat	plasma membrane	58.93	37.99
TraesCS3D01G311500.1	Wheat	plasma membrane	58.82	37.91
HORVU3Hr1G093530.7	Barley	plasma membrane	58.82	37.82
VIT_05s0062g01100.t01	Wine grape	plasma membrane	57.75	37.8
TraesCS3B01G458900.1	Wheat	plasma membrane	58.58	37.79
Zm00001d042362_P001	Maize	plasma membrane	58.93	37.76
TraesCS2D01G034200.1	Wheat	plasma membrane	58.22	37.53
PGSC0003DMT400055685	Potato	cytosol, plasma membrane, plastid	54.67	37.38
TraesCS6A01G166200.1	Wheat	plasma membrane	51.6	36.7
Solyc09g098420.1.1	Tomato	plasma membrane	54.91	36.54
TraesCS6B01G193600.1	Wheat	plasma membrane	54.91	35.83
EES06446	Sorghum	plasma membrane	51.12	35.53
Zm00001d012048_P001	Maize	plasma membrane	36.69	35.07
TraesCS6D01G154800.2	Wheat	mitochondrion, nucleus, plasma membrane, plastid	54.67	34.68
Zm00001d015853_P001	Maize	plasma membrane	52.54	34.55
HORVU6Hr1G033670.5	Barley	plasma membrane	53.02	34.12
Os02t0194400-02	Rice	plastid	54.32	32.48
CDX70023	Canola	plasma membrane	30.18	30.5
AT5G07280.1	Thale cress	plasma membrane	42.01	29.78
Bra009277.1-P	Field mustard	plasma membrane	42.72	29.28
CDX98990	Canola	plasma membrane	32.07	29.27
KRG91463	Soybean	plasma membrane	42.84	28.55
KRH35354	Soybean	plasma membrane	42.72	28.45
GSMUA_Achr2P15100_001	Banana	plasma membrane	25.33	28.01
GSMUA_Achr4P08920_001	Banana	plasma membrane, vacuole	28.28	27.07
GSMUA_Achr6P35950_001	Banana	plasma membrane	28.4	26.73
GSMUA_Achr1P05250_001	Banana	golgi, plasma membrane	25.09	25.82
GSMUA_AchrUn_...	Banana	plasma membrane	24.38	25.62
GSMUA_Achr9P19060_001	Banana	plasma membrane	22.6	24.3
GSMUA_Achr2P05500_001	Banana	plasma membrane	21.78	23.68
GSMUA_Achr3P18780_001	Banana	cytosol	13.25	19.89
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	20.71	19.89
GSMUA_Achr6P16720_001	Banana	plastid, vacuole	19.29	19.73
GSMUA_Achr6P23960_001	Banana	cytosol	13.73	16.27

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr5G25270_001	EnsemblPlants:GSMUA_Achr5P25270_001	EnsemblPlants:GSMUA_Achr5T25270_001	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M0T1K2
PFAM:PF00069	PFAM:PF00560	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27000	PANTHER:PTHR27000:SF163	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000295A8E9	SEG:seg

Description

Putative Receptor-like protein kinase [Source:GMGC_GENE;Acc:GSMUA_Achr5G25270_001]

Coordinates

chr5:-:26338816..26342715

Molecular Weight (calculated)

91570.4 Da

IEP (calculated)

5.509

GRAVY (calculated)

0.057

Length

845 amino acids

Sequence
(BLAST)

001: MSTRGKRSQT LHALSFFVIF VVPYTPFLHA SYTVEMEKLL TLRDSLSQGR NLLSNWFSVE SPCNWSGITC FRHLKALNLS GCGFSGQVPD SFGDLQTLQS
101: LDLSRNQLSG ALPSSLANLK MLKELLSISG NSFSGSIPLD IGSLQNLEYL DLSINYLSGT LPSSLENLSR LLHLDVSRNR LSGSIFPGIG SLGDLLTLDL
201: SSNSFIGSLP STIGRLTSLD SLWLGRNGFT GRTVPREISE LRNLIDLDIS ENKFEGELPR SIGNLVNLMY LILDLSFNSF SGPLPASLAG LESITTFIVE
301: GNHLEGPIPP WISNWKMVNS IRLGKNQFKI PSKICDCRSL SSLSLSENKL TGSIEETFRG CSNLTDLILL GNNLHGEIPD YLGELPLVTL ELSQNNFSGH
401: IPTELFNCTN LVALDLGSNN LTGSIPEAIS RLNLLDDLVL SNNQLSGHIP GQIPAAIKNC AVLKELRLQG NMLSGSIPPE LAELTNLTLL DFSFNSLSGP
501: ILLNLSSNRL TGPIPETVFD IKTLTDSVSN LTSLAVLDLH NNSLTGSLPS SLSKLDYLTY LDLSNNGFLG DIPCDVCTNR CVAQLVPYPP PTRSPNGGLI
601: WGVGLGAAAN LAAVEPASTT ENFSKARIIG DGGFGTVYRA VLPEECVVAI KRLHGGGQFQ GDREFLAEME TIGKVKHRNL VPLLGYCICL GSARGLAFLH
701: HGFVPHIIHR DMKSSNILLD KDFEPRVSDF GLAPTAKGDV YSFGVVTLEL LTGWPPTGQE EVEGGGNLVG WVRWMVGRGK EAEVFDPCLP HAGGGPSREQ
801: MMRVLAVARA CTADEPWKRP TMLEVVKMLN EIKMEACGDL VTRHV

Best Arabidopsis Sequence Match ( AT1G17230.1 )
(BLAST)

0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I

Arabidopsis Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.