Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- mitochondrion 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G193600.1 | Wheat | plasma membrane | 94.29 | 96.99 |
| TraesCS6A01G166200.1 | Wheat | plasma membrane | 86.49 | 96.97 |
| HORVU6Hr1G033670.5 | Barley | plasma membrane | 88.51 | 89.79 |
| TraesCS3D01G418600.1 | Wheat | plasma membrane, plastid | 27.85 | 68.83 |
| TraesCS2D01G297600.2 | Wheat | plasma membrane | 63.81 | 67.68 |
| TraesCS3D01G311500.1 | Wheat | plasma membrane | 65.69 | 66.74 |
| TraesCS2D01G034200.1 | Wheat | plasma membrane | 65.09 | 66.13 |
| EES06446 | Sorghum | plasma membrane | 56.61 | 62.01 |
| Zm00001d015853_P001 | Maize | plasma membrane | 57.73 | 59.84 |
| Os02t0194400-02 | Rice | plastid | 62.99 | 59.38 |
| GSMUA_Achr8P00900_001 | Banana | plasma membrane | 42.72 | 56.62 |
| GSMUA_Achr5P25270_001 | Banana | plasma membrane | 34.68 | 54.67 |
| VIT_05s0062g01100.t01 | Wine grape | plasma membrane | 50.45 | 52.05 |
| PGSC0003DMT400055685 | Potato | cytosol, plasma membrane, plastid | 47.67 | 51.38 |
| Solyc09g098420.1.1 | Tomato | plasma membrane | 47.6 | 49.92 |
| CDX70023 | Canola | plasma membrane | 27.33 | 43.54 |
| AT5G07280.1 | Thale cress | plasma membrane | 38.36 | 42.87 |
| Bra009277.1-P | Field mustard | plasma membrane | 39.04 | 42.17 |
| CDX98990 | Canola | plasma membrane | 28.75 | 41.36 |
| KRG91463 | Soybean | plasma membrane | 38.59 | 40.54 |
| KRH35354 | Soybean | plasma membrane | 38.14 | 40.03 |
| TraesCS5D01G181500.1 | Wheat | plasma membrane | 29.73 | 32.73 |
| TraesCS3D01G099700.1 | Wheat | plasma membrane | 27.93 | 31.99 |
| TraesCS3D01G246500.1 | Wheat | plasma membrane | 26.8 | 31.76 |
| TraesCS3D01G496100.1 | Wheat | plasma membrane | 22.3 | 27.45 |
| TraesCS2D01G190200.2 | Wheat | plasma membrane | 22.52 | 27.03 |
| TraesCS2D01G053000.1 | Wheat | plasma membrane | 20.27 | 26.79 |
| TraesCS7D01G424900.1 | Wheat | plasma membrane | 14.34 | 25.37 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.1.7.2 | MapMan:18.4.1.10.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 | PFAM:PF07714 |
| PFAM:PF08263 | PFAM:PF13516 | PFAM:PF13855 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR27000 | PANTHER:PTHR27000:SF163 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6D01G154800 | EnsemblPlants:TraesCS6D01G154800.2 | TIGR:cd14066 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6D:+:130169714..130175514
Molecular Weight (calculated)
145289.0 Da
IEP (calculated)
7.561
GRAVY (calculated)
0.010
Length
1332 amino acids
Sequence
(BLAST)
(BLAST)
0001: MRSPCRRRRQ RWRRPAHKDG EHGRRPTGLP RAGEGAKRAT RDSLYLLVQL LCIIRISASP ESDKRNLFVL RNAIPQGKGF LSDWFDPKTP PCRWSGITCA
0101: GDAVVAIDLS HVPLYVPFPS CIGAFQLLVR LKVSGCQFNG ELPEVVGNLR QLQYLDLSNN QLAGPLPVSV FDLKMLKELV LDKNCLSGQL SPAIGQLQHL
0201: TKLSMSVNSI SGSLPPELGT LQNLEFLNLN RNTFSGSLPA AFSNLTRLSY LAASNNSLTG SIFPGIGTLV NLRRLVLSSN GLTGPIPEEI GQLENLELIN
0301: LMNNGFTGSI PEEIGHLKRL KVLKLSNCKF NGAIPRSIGG LESLMTLDIS GNNFTAELPT SVGELSNLTK LLAVHAGLTG AIPKELGNCK KLTAIDMSFN
0401: HFTGSIPEEL AELEAIISFK AEGNRLSGRI PDWLRNWGNI MSISLANNMF SGPLPLLPLQ HLVEFSAGKN LLSGPIPAGV CQAISLRSLN LYSNNLTGSI
0501: KETFKGCRNL TTLNLQVNQL CGEIPEYLAE LQLVSLDLTQ NNFTGSLPDK FWESSTVQEL YLSDNNLTGM IPESIAELSH LKILRIDNNY LEGPIPRSVG
0601: TLKGLITLSL CCNMLSGNIP VELFNCTNLV TLDLSYNSLT GHIPREISRL TLLNSLALSN NQLSGTIPSE ICVGFSRASH VDLRFYQHQR LLDLSYNQLT
0701: GQIPTTIKDC AIVVELYLQG NLLNGTIPAE LGELTGLATI DLSFNALVGH MLPWSAPSVQ LQGLSLSNNR LNGSIPAEIG HILPAIYKLN LSGNTLTGNL
0801: PQSLLCNHHL SRLDVSNNNL SGEILFSCPD GDEGSSSALK TFNASNNHFS GSLDVSISNF TGLTSLDIHS NSLNGSLPSA VCNVTTLNYL DLSSNDFSGT
0901: IPCGICDMFN LVFANFSGNH IVGTYNLADC AANNINHKAA HPSYRVSLAA IVCGITIIII LLVLLGVYLR RRLLKRRSSW ALVPASKTMV TSEETLRSKL
1001: LGKKSREPLS INLATFEHSL MRVAADDILK ATENFSNLHI IGDGGFGTVY RAALFGGRQV AVKRLHGGHQ LQDNREFQAE IETIGKVKHP NLVPLLGYCA
1101: SGDERFLIYE YMEHGCLEAW LRKNRTDAAY ALGWPDRLKI CLGSAKGLAF LHHGFVPHII HRDMKSSNIL LDWDLEPRVS DFGLARIISA CETHVSTNLA
1201: GTLGYIPPEY GLSMRCTARG DVYSFGVVML ELLTGQEPTG QEVDEGGGSL VGWVQWMVAC RREKEVFDPC LLPASGACRQ QMARVLAIAR DCTADDPWAR
1301: PTMLEVVKGL KATRMMENAP PATTLSRADL RW
0101: GDAVVAIDLS HVPLYVPFPS CIGAFQLLVR LKVSGCQFNG ELPEVVGNLR QLQYLDLSNN QLAGPLPVSV FDLKMLKELV LDKNCLSGQL SPAIGQLQHL
0201: TKLSMSVNSI SGSLPPELGT LQNLEFLNLN RNTFSGSLPA AFSNLTRLSY LAASNNSLTG SIFPGIGTLV NLRRLVLSSN GLTGPIPEEI GQLENLELIN
0301: LMNNGFTGSI PEEIGHLKRL KVLKLSNCKF NGAIPRSIGG LESLMTLDIS GNNFTAELPT SVGELSNLTK LLAVHAGLTG AIPKELGNCK KLTAIDMSFN
0401: HFTGSIPEEL AELEAIISFK AEGNRLSGRI PDWLRNWGNI MSISLANNMF SGPLPLLPLQ HLVEFSAGKN LLSGPIPAGV CQAISLRSLN LYSNNLTGSI
0501: KETFKGCRNL TTLNLQVNQL CGEIPEYLAE LQLVSLDLTQ NNFTGSLPDK FWESSTVQEL YLSDNNLTGM IPESIAELSH LKILRIDNNY LEGPIPRSVG
0601: TLKGLITLSL CCNMLSGNIP VELFNCTNLV TLDLSYNSLT GHIPREISRL TLLNSLALSN NQLSGTIPSE ICVGFSRASH VDLRFYQHQR LLDLSYNQLT
0701: GQIPTTIKDC AIVVELYLQG NLLNGTIPAE LGELTGLATI DLSFNALVGH MLPWSAPSVQ LQGLSLSNNR LNGSIPAEIG HILPAIYKLN LSGNTLTGNL
0801: PQSLLCNHHL SRLDVSNNNL SGEILFSCPD GDEGSSSALK TFNASNNHFS GSLDVSISNF TGLTSLDIHS NSLNGSLPSA VCNVTTLNYL DLSSNDFSGT
0901: IPCGICDMFN LVFANFSGNH IVGTYNLADC AANNINHKAA HPSYRVSLAA IVCGITIIII LLVLLGVYLR RRLLKRRSSW ALVPASKTMV TSEETLRSKL
1001: LGKKSREPLS INLATFEHSL MRVAADDILK ATENFSNLHI IGDGGFGTVY RAALFGGRQV AVKRLHGGHQ LQDNREFQAE IETIGKVKHP NLVPLLGYCA
1101: SGDERFLIYE YMEHGCLEAW LRKNRTDAAY ALGWPDRLKI CLGSAKGLAF LHHGFVPHII HRDMKSSNIL LDWDLEPRVS DFGLARIISA CETHVSTNLA
1201: GTLGYIPPEY GLSMRCTARG DVYSFGVVML ELLTGQEPTG QEVDEGGGSL VGWVQWMVAC RREKEVFDPC LLPASGACRQ QMARVLAIAR DCTADDPWAR
1301: PTMLEVVKGL KATRMMENAP PATTLSRADL RW
0001: MQPLVLLLLF ILCFSGLGQP GIINNDLQTL LEVKKSLVTN PQEDDPLRQW NSDNINYCSW TGVTCDNTGL FRVIALNLTG LGLTGSISPW FGRFDNLIHL
0101: DLSSNNLVGP IPTALSNLTS LESLFLFSNQ LTGEIPSQLG SLVNIRSLRI GDNELVGDIP ETLGNLVNLQ MLALASCRLT GPIPSQLGRL VRVQSLILQD
0201: NYLEGPIPAE LGNCSDLTVF TAAENMLNGT IPAELGRLEN LEILNLANNS LTGEIPSQLG EMSQLQYLSL MANQLQGLIP KSLADLGNLQ TLDLSANNLT
0301: GEIPEEFWNM SQLLDLVLAN NHLSGSLPKS ICSNNTNLEQ LVLSGTQLSG EIPVELSKCQ SLKQLDLSNN SLAGSIPEAL FELVELTDLY LHNNTLEGTL
0401: SPSISNLTNL QWLVLYHNNL EGKLPKEISA LRKLEVLFLY ENRFSGEIPQ EIGNCTSLKM IDMFGNHFEG EIPPSIGRLK ELNLLHLRQN ELVGGLPASL
0501: GNCHQLNILD LADNQLSGSI PSSFGFLKGL EQLMLYNNSL QGNLPDSLIS LRNLTRINLS HNRLNGTIHP LCGSSSYLSF DVTNNGFEDE IPLELGNSQN
0601: LDRLRLGKNQ LTGKIPWTLG KIRELSLLDM SSNALTGTIP LQLVLCKKLT HIDLNNNFLS GPIPPWLGKL SQLGELKLSS NQFVESLPTE LFNCTKLLVL
0701: SLDGNSLNGS IPQEIGNLGA LNVLNLDKNQ FSGSLPQAMG KLSKLYELRL SRNSLTGEIP VEIGQLQDLQ SALDLSYNNF TGDIPSTIGT LSKLETLDLS
0801: HNQLTGEVPG SVGDMKSLGY LNVSFNNLGG KLKKQFSRWP ADSFLGNTGL CGSPLSRCNR VRSNNKQQGL SARSVVIISA ISALTAIGLM ILVIALFFKQ
0901: RHDFFKKVGH GSTAYTSSSS SSQATHKPLF RNGASKSDIR WEDIMEATHN LSEEFMIGSG GSGKVYKAEL ENGETVAVKK ILWKDDLMSN KSFSREVKTL
1001: GRIRHRHLVK LMGYCSSKSE GLNLLIYEYM KNGSIWDWLH EDKPVLEKKK KLLDWEARLR IAVGLAQGVE YLHHDCVPPI VHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKVLT ENCDTNTDSN TWFACSYGYI APEYAYSLKA TEKSDVYSMG IVLMEIVTGK MPTDSVFGAE MDMVRWVETH LEVAGSARDK LIDPKLKPLL
1201: PFEEDAACQV LEIALQCTKT SPQERPSSRQ ACDSLLHVYN NRTAGYKKL
0101: DLSSNNLVGP IPTALSNLTS LESLFLFSNQ LTGEIPSQLG SLVNIRSLRI GDNELVGDIP ETLGNLVNLQ MLALASCRLT GPIPSQLGRL VRVQSLILQD
0201: NYLEGPIPAE LGNCSDLTVF TAAENMLNGT IPAELGRLEN LEILNLANNS LTGEIPSQLG EMSQLQYLSL MANQLQGLIP KSLADLGNLQ TLDLSANNLT
0301: GEIPEEFWNM SQLLDLVLAN NHLSGSLPKS ICSNNTNLEQ LVLSGTQLSG EIPVELSKCQ SLKQLDLSNN SLAGSIPEAL FELVELTDLY LHNNTLEGTL
0401: SPSISNLTNL QWLVLYHNNL EGKLPKEISA LRKLEVLFLY ENRFSGEIPQ EIGNCTSLKM IDMFGNHFEG EIPPSIGRLK ELNLLHLRQN ELVGGLPASL
0501: GNCHQLNILD LADNQLSGSI PSSFGFLKGL EQLMLYNNSL QGNLPDSLIS LRNLTRINLS HNRLNGTIHP LCGSSSYLSF DVTNNGFEDE IPLELGNSQN
0601: LDRLRLGKNQ LTGKIPWTLG KIRELSLLDM SSNALTGTIP LQLVLCKKLT HIDLNNNFLS GPIPPWLGKL SQLGELKLSS NQFVESLPTE LFNCTKLLVL
0701: SLDGNSLNGS IPQEIGNLGA LNVLNLDKNQ FSGSLPQAMG KLSKLYELRL SRNSLTGEIP VEIGQLQDLQ SALDLSYNNF TGDIPSTIGT LSKLETLDLS
0801: HNQLTGEVPG SVGDMKSLGY LNVSFNNLGG KLKKQFSRWP ADSFLGNTGL CGSPLSRCNR VRSNNKQQGL SARSVVIISA ISALTAIGLM ILVIALFFKQ
0901: RHDFFKKVGH GSTAYTSSSS SSQATHKPLF RNGASKSDIR WEDIMEATHN LSEEFMIGSG GSGKVYKAEL ENGETVAVKK ILWKDDLMSN KSFSREVKTL
1001: GRIRHRHLVK LMGYCSSKSE GLNLLIYEYM KNGSIWDWLH EDKPVLEKKK KLLDWEARLR IAVGLAQGVE YLHHDCVPPI VHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKVLT ENCDTNTDSN TWFACSYGYI APEYAYSLKA TEKSDVYSMG IVLMEIVTGK MPTDSVFGAE MDMVRWVETH LEVAGSARDK LIDPKLKPLL
1201: PFEEDAACQV LEIALQCTKT SPQERPSSRQ ACDSLLHVYN NRTAGYKKL
Arabidopsis Description
GSO1LRR receptor-like serine/threonine-protein kinase GSO1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGQ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.