Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G166200.1 | Wheat | plasma membrane | 88.8 | 96.8 |
| TraesCS6D01G154800.2 | Wheat | mitochondrion, nucleus, plasma membrane, plastid | 96.99 | 94.29 |
| HORVU6Hr1G033670.5 | Barley | plasma membrane | 90.73 | 89.49 |
| TraesCS3B01G458900.1 | Wheat | plasma membrane | 66.72 | 65.95 |
| EES06446 | Sorghum | plasma membrane | 57.84 | 61.6 |
| Zm00001d015853_P001 | Maize | plasma membrane | 58.92 | 59.38 |
| Os02t0194400-02 | Rice | plastid | 64.09 | 58.74 |
| GSMUA_Achr8P00900_001 | Banana | plasma membrane | 43.94 | 56.62 |
| GSMUA_Achr5P25270_001 | Banana | plasma membrane | 35.83 | 54.91 |
| VIT_05s0062g01100.t01 | Wine grape | plasma membrane | 51.51 | 51.67 |
| PGSC0003DMT400055685 | Potato | cytosol, plasma membrane, plastid | 48.73 | 51.05 |
| Solyc09g098420.1.1 | Tomato | plasma membrane | 48.49 | 49.45 |
| CDX70023 | Canola | plasma membrane | 27.49 | 42.58 |
| AT5G07280.1 | Thale cress | plasma membrane | 38.92 | 42.28 |
| Bra009277.1-P | Field mustard | plasma membrane | 39.61 | 41.61 |
| CDX98990 | Canola | plasma membrane | 29.11 | 40.71 |
| KRG91463 | Soybean | plasma membrane | 39.3 | 40.14 |
| KRH35354 | Soybean | plasma membrane | 38.84 | 39.64 |
| TraesCS5B01G174400.1 | Wheat | plasma membrane | 30.89 | 32.92 |
| TraesCS3B01G115800.1 | Wheat | plasma membrane | 28.8 | 32.13 |
| TraesCS3B01G275000.1 | Wheat | plasma membrane, plastid | 27.34 | 29.4 |
| TraesCS3B01G550900.1 | Wheat | plasma membrane | 23.01 | 27.52 |
| TraesCS3B01G551200.1 | Wheat | plasma membrane | 22.39 | 26.85 |
| TraesCS2B01G208900.1 | Wheat | plasma membrane | 22.93 | 26.71 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.1.7.2 | MapMan:18.4.1.10.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 |
| GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf |
| InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF00560 | PFAM:PF07714 |
| PFAM:PF08263 | PFAM:PF13516 | PFAM:PF13855 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR27000 | PANTHER:PTHR27000:SF163 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SMART:SM00369 |
| SUPFAM:SSF52047 | SUPFAM:SSF52058 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-noTM |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS6B01G193600 | EnsemblPlants:TraesCS6B01G193600.1 | TIGR:cd14066 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:+:228686910..228694666
Molecular Weight (calculated)
140987.0 Da
IEP (calculated)
6.579
GRAVY (calculated)
0.092
Length
1295 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLWKDSLYLL VQLICIIRIS ASPQSDKRNL FVLRNAIPQG KGFLSDWFDP KTPPCSWSGI TCAGDAVVAI DLSHVPLYVP FPSCIGAFQL LVRLKVSGCQ
0101: FNGELPEVVG NLRQLQYLDL SNNQLAGPLP VSLFDLKMLK ELVLDKNCLS GQLSPAIGQL QHLTKLSMSM NSISGSLPPE LGTLQNLEFL NLNRNTFSGS
0201: LPAAFCNLTR LSYLAASNNS LTGSIFPGIG ALVNLRRLVL SSNGLTGPIP EEIGQLENLE LINLMNNGFT GSIPEEIGHL KRLKVLKLSN CEFNGAIPRS
0301: IGGLESLMTL DISGNNFTAE LPTSVGELSN LTKLLAVHAG LTGAIPKELG NCKKITVIDL SFNHFTGSIP EELAELEAII SFKAEGNRLS GRIPDWLQNW
0401: GNIMSILLTN NMFSGPLPLL PLQHLVEFSA GKNLLSGPIP AGVCQAISLR SLNLYSNNLT GSIKETFKGC RNLTILSLQV NQLCGEIPEY LAELPLVSLD
0501: LTQNNFTGSL PDKFWESSTV QELYLSDNNL TGMIPESLAE LSHVKILRID NNYLEGPIPR SVGTLKGLIT LSLHCNMLSG NIPVELFNCT NLVTLDLSYN
0601: SLTGHIPREI SRLTLLNSLA LSNNQLSGTI PSEICVGFSR VSRVDLRFYQ HQRLLDLSYN QLTGQIPTTI KDCAIVAELC LQGNLLNGTI PAELGELTGL
0701: ATIDLSFNAL VGHMLPWSAP SVQLQDLSLS NNRLNGSIPA EIGHILPAIY KLNLSGNTLT GNLPPSLLCN HHLSRLDVSN NNLSGEILFS CPDGDEGSSS
0801: ALNTFNASNN HFSGSLDVSI SNFTGLTSLD IHSNSLNGSL PSAVCNVTTL NYLDLSSNDF SGTIPCGICD MFNLVFANFS GNHIVGTYNL ADCAANNINH
0901: KAAHPSYRVS LAAIVCGITI IIILLVLLGV YLRRRLLKRR SSWALVPVSK TMVTSEETLR SKLLGKKSRE PLSINLATFE HSLMRVAADD ILKATENFSN
1001: LHIIGDGGFG TVYRAALFGG RQVAVKRLHG GHQLQDNREF QAEIETIGKV KHPNLVPLLG YCASGDERFL IYEYMEHGCL EAWLRKNRTD AAYALGWPDR
1101: LKICLGSAKG LAFLHHGFVP HIIHRDMKSS NILLDWDLEP RVSDFGLARI ISACETHVST NLAGTLGYIP PEYGLSMQCT ARGDVYSFGV VMLELLTRQA
1201: PTGQEVDEGG GSLVGWVQWM VARHREKEVF DPCLLPASGA CRQQMARVLA IARDCTADDP WARPTMLEVV KGLKATQMME SSPPATTLSR ADLRW
0101: FNGELPEVVG NLRQLQYLDL SNNQLAGPLP VSLFDLKMLK ELVLDKNCLS GQLSPAIGQL QHLTKLSMSM NSISGSLPPE LGTLQNLEFL NLNRNTFSGS
0201: LPAAFCNLTR LSYLAASNNS LTGSIFPGIG ALVNLRRLVL SSNGLTGPIP EEIGQLENLE LINLMNNGFT GSIPEEIGHL KRLKVLKLSN CEFNGAIPRS
0301: IGGLESLMTL DISGNNFTAE LPTSVGELSN LTKLLAVHAG LTGAIPKELG NCKKITVIDL SFNHFTGSIP EELAELEAII SFKAEGNRLS GRIPDWLQNW
0401: GNIMSILLTN NMFSGPLPLL PLQHLVEFSA GKNLLSGPIP AGVCQAISLR SLNLYSNNLT GSIKETFKGC RNLTILSLQV NQLCGEIPEY LAELPLVSLD
0501: LTQNNFTGSL PDKFWESSTV QELYLSDNNL TGMIPESLAE LSHVKILRID NNYLEGPIPR SVGTLKGLIT LSLHCNMLSG NIPVELFNCT NLVTLDLSYN
0601: SLTGHIPREI SRLTLLNSLA LSNNQLSGTI PSEICVGFSR VSRVDLRFYQ HQRLLDLSYN QLTGQIPTTI KDCAIVAELC LQGNLLNGTI PAELGELTGL
0701: ATIDLSFNAL VGHMLPWSAP SVQLQDLSLS NNRLNGSIPA EIGHILPAIY KLNLSGNTLT GNLPPSLLCN HHLSRLDVSN NNLSGEILFS CPDGDEGSSS
0801: ALNTFNASNN HFSGSLDVSI SNFTGLTSLD IHSNSLNGSL PSAVCNVTTL NYLDLSSNDF SGTIPCGICD MFNLVFANFS GNHIVGTYNL ADCAANNINH
0901: KAAHPSYRVS LAAIVCGITI IIILLVLLGV YLRRRLLKRR SSWALVPVSK TMVTSEETLR SKLLGKKSRE PLSINLATFE HSLMRVAADD ILKATENFSN
1001: LHIIGDGGFG TVYRAALFGG RQVAVKRLHG GHQLQDNREF QAEIETIGKV KHPNLVPLLG YCASGDERFL IYEYMEHGCL EAWLRKNRTD AAYALGWPDR
1101: LKICLGSAKG LAFLHHGFVP HIIHRDMKSS NILLDWDLEP RVSDFGLARI ISACETHVST NLAGTLGYIP PEYGLSMQCT ARGDVYSFGV VMLELLTRQA
1201: PTGQEVDEGG GSLVGWVQWM VARHREKEVF DPCLLPASGA CRQQMARVLA IARDCTADDP WARPTMLEVV KGLKATQMME SSPPATTLSR ADLRW
0001: MQPLVLLLLF ILCFSGLGQP GIINNDLQTL LEVKKSLVTN PQEDDPLRQW NSDNINYCSW TGVTCDNTGL FRVIALNLTG LGLTGSISPW FGRFDNLIHL
0101: DLSSNNLVGP IPTALSNLTS LESLFLFSNQ LTGEIPSQLG SLVNIRSLRI GDNELVGDIP ETLGNLVNLQ MLALASCRLT GPIPSQLGRL VRVQSLILQD
0201: NYLEGPIPAE LGNCSDLTVF TAAENMLNGT IPAELGRLEN LEILNLANNS LTGEIPSQLG EMSQLQYLSL MANQLQGLIP KSLADLGNLQ TLDLSANNLT
0301: GEIPEEFWNM SQLLDLVLAN NHLSGSLPKS ICSNNTNLEQ LVLSGTQLSG EIPVELSKCQ SLKQLDLSNN SLAGSIPEAL FELVELTDLY LHNNTLEGTL
0401: SPSISNLTNL QWLVLYHNNL EGKLPKEISA LRKLEVLFLY ENRFSGEIPQ EIGNCTSLKM IDMFGNHFEG EIPPSIGRLK ELNLLHLRQN ELVGGLPASL
0501: GNCHQLNILD LADNQLSGSI PSSFGFLKGL EQLMLYNNSL QGNLPDSLIS LRNLTRINLS HNRLNGTIHP LCGSSSYLSF DVTNNGFEDE IPLELGNSQN
0601: LDRLRLGKNQ LTGKIPWTLG KIRELSLLDM SSNALTGTIP LQLVLCKKLT HIDLNNNFLS GPIPPWLGKL SQLGELKLSS NQFVESLPTE LFNCTKLLVL
0701: SLDGNSLNGS IPQEIGNLGA LNVLNLDKNQ FSGSLPQAMG KLSKLYELRL SRNSLTGEIP VEIGQLQDLQ SALDLSYNNF TGDIPSTIGT LSKLETLDLS
0801: HNQLTGEVPG SVGDMKSLGY LNVSFNNLGG KLKKQFSRWP ADSFLGNTGL CGSPLSRCNR VRSNNKQQGL SARSVVIISA ISALTAIGLM ILVIALFFKQ
0901: RHDFFKKVGH GSTAYTSSSS SSQATHKPLF RNGASKSDIR WEDIMEATHN LSEEFMIGSG GSGKVYKAEL ENGETVAVKK ILWKDDLMSN KSFSREVKTL
1001: GRIRHRHLVK LMGYCSSKSE GLNLLIYEYM KNGSIWDWLH EDKPVLEKKK KLLDWEARLR IAVGLAQGVE YLHHDCVPPI VHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKVLT ENCDTNTDSN TWFACSYGYI APEYAYSLKA TEKSDVYSMG IVLMEIVTGK MPTDSVFGAE MDMVRWVETH LEVAGSARDK LIDPKLKPLL
1201: PFEEDAACQV LEIALQCTKT SPQERPSSRQ ACDSLLHVYN NRTAGYKKL
0101: DLSSNNLVGP IPTALSNLTS LESLFLFSNQ LTGEIPSQLG SLVNIRSLRI GDNELVGDIP ETLGNLVNLQ MLALASCRLT GPIPSQLGRL VRVQSLILQD
0201: NYLEGPIPAE LGNCSDLTVF TAAENMLNGT IPAELGRLEN LEILNLANNS LTGEIPSQLG EMSQLQYLSL MANQLQGLIP KSLADLGNLQ TLDLSANNLT
0301: GEIPEEFWNM SQLLDLVLAN NHLSGSLPKS ICSNNTNLEQ LVLSGTQLSG EIPVELSKCQ SLKQLDLSNN SLAGSIPEAL FELVELTDLY LHNNTLEGTL
0401: SPSISNLTNL QWLVLYHNNL EGKLPKEISA LRKLEVLFLY ENRFSGEIPQ EIGNCTSLKM IDMFGNHFEG EIPPSIGRLK ELNLLHLRQN ELVGGLPASL
0501: GNCHQLNILD LADNQLSGSI PSSFGFLKGL EQLMLYNNSL QGNLPDSLIS LRNLTRINLS HNRLNGTIHP LCGSSSYLSF DVTNNGFEDE IPLELGNSQN
0601: LDRLRLGKNQ LTGKIPWTLG KIRELSLLDM SSNALTGTIP LQLVLCKKLT HIDLNNNFLS GPIPPWLGKL SQLGELKLSS NQFVESLPTE LFNCTKLLVL
0701: SLDGNSLNGS IPQEIGNLGA LNVLNLDKNQ FSGSLPQAMG KLSKLYELRL SRNSLTGEIP VEIGQLQDLQ SALDLSYNNF TGDIPSTIGT LSKLETLDLS
0801: HNQLTGEVPG SVGDMKSLGY LNVSFNNLGG KLKKQFSRWP ADSFLGNTGL CGSPLSRCNR VRSNNKQQGL SARSVVIISA ISALTAIGLM ILVIALFFKQ
0901: RHDFFKKVGH GSTAYTSSSS SSQATHKPLF RNGASKSDIR WEDIMEATHN LSEEFMIGSG GSGKVYKAEL ENGETVAVKK ILWKDDLMSN KSFSREVKTL
1001: GRIRHRHLVK LMGYCSSKSE GLNLLIYEYM KNGSIWDWLH EDKPVLEKKK KLLDWEARLR IAVGLAQGVE YLHHDCVPPI VHRDIKSSNV LLDSNMEAHL
1101: GDFGLAKVLT ENCDTNTDSN TWFACSYGYI APEYAYSLKA TEKSDVYSMG IVLMEIVTGK MPTDSVFGAE MDMVRWVETH LEVAGSARDK LIDPKLKPLL
1201: PFEEDAACQV LEIALQCTKT SPQERPSSRQ ACDSLLHVYN NRTAGYKKL
Arabidopsis Description
GSO1LRR receptor-like serine/threonine-protein kinase GSO1 [Source:UniProtKB/Swiss-Prot;Acc:C0LGQ5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.