Factsheet for Zm00001d012048_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d023681_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G07280.1	Zm00001d023681_P001	AT4G24972.1	18250314

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01957	Sorghum	plasma membrane	88.01	60.17
Zm00001d042362_P001	Maize	plasma membrane	87.44	58.6
Os01t0917500-01	Rice	plasma membrane	69.23	47.3
TraesCS2D01G297600.2	Wheat	plasma membrane	66.29	46.66
TraesCS3A01G423400.1	Wheat	plasma membrane	68.89	46.45
HORVU3Hr1G093530.7	Barley	plasma membrane	68.89	46.35
TraesCS3D01G311500.1	Wheat	plasma membrane	68.67	46.3
TraesCS3B01G458900.1	Wheat	plasma membrane	68.55	46.26
TraesCS2D01G034200.1	Wheat	plasma membrane	67.87	45.77
Zm00001d015853_P001	Maize	plasma membrane	59.84	41.17
GSMUA_Achr5P25270_001	Banana	plasma membrane	35.07	36.69
GSMUA_Achr8P00900_001	Banana	plasma membrane	39.82	35.02
VIT_05s0062g01100.t01	Wine grape	plasma membrane	48.64	33.31
PGSC0003DMT400055685	Potato	cytosol, plasma membrane, plastid	45.81	32.77
Solyc09g098420.1.1	Tomato	plasma membrane	46.61	32.44
TraesCS3D01G418600.1	Wheat	plasma membrane, plastid	19.12	31.35
AT5G07280.1	Thale cress	plasma membrane	35.18	26.09
CDX98990	Canola	plasma membrane	26.7	25.49
KRH35354	Soybean	plasma membrane	35.97	25.06
Bra009277.1-P	Field mustard	plasma membrane	34.84	24.98
KRG91463	Soybean	plasma membrane	35.75	24.92
CDX70023	Canola	plasma membrane	21.61	22.85
Zm00001d014769_P001	Maize	cytosol, extracellular, nucleus	7.35	22.73
Zm00001d011721_P001	Maize	plasma membrane	24.43	19.25
Zm00001d041327_P002	Maize	mitochondrion	15.5	19.11
Zm00001d043634_P001	Maize	plasma membrane	23.98	19.03
Zm00001d019983_P001	Maize	plasma membrane	25.57	18.6
Zm00001d050132_P001	Maize	plasma membrane	25.11	18.38
Zm00001d000055_P001	Maize	plastid	23.08	18.25
Zm00001d022044_P001	Maize	plasma membrane	19.91	15.99

Protein Annotations

Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1D6G681	ProteinID:AQK98700.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF163	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058	SUPFAM:SSF56112	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000843CAC3	EnsemblPlantsGene:Zm00001d012048	EnsemblPlants:Zm00001d012048_P001	EnsemblPlants:Zm00001d012048_T001	SEG:seg

Description

Putative leucine-rich repeat receptor-like protein kinase family protein

Coordinates

chr8:-:167205232..167221108

Molecular Weight (calculated)

95917.2 Da

IEP (calculated)

6.472

GRAVY (calculated)

0.138

Length

884 amino acids

Sequence
(BLAST)

001: MGSLFFVFIL LICFTPSSAL AGHNDINILS KLREAVTEGK GFLRDWFDSE KSPCSWSGIT CVENTVVRID LSSVPIYAPF PLCVGSFQSL AHLNFSGCGF
101: FGELPDALGN LHSLEYLDLS HNQLTGALPV SLYGLKTLKE MVLDNNFFSG QLSPAIAQLK YLKKLSVSSN SISGAIPPEL GSLQNLELLD LHMNALNGSI
201: PAALGNLSRL LHLDASQNNI HGSIFPGITA MANLIIVDLS SNALAGPLPR EIVQLQNAQS LILGYNGFNG SIPEEIGELK LLEELELPGC KLTGIPWTVG
301: SLRSLRKLDI SGNDFNTELP ASIGKLGNLT LLYARSAGLT ANIPRELETN MLSGSIPSEI CQANSLQSLM LHNNNLTGNI MEAFKECMNL TELNLQGNHL
401: HGEIPHYLSE LPLVIVELSQ NNFTGKLPEK LWESSTILEI TLSYNQLTGP IPESVGRLSS LQRLRIDSNY LEGPISRSIG ALRNLTNLSL WGNRLSGNIP
501: LELFNCRNLV TLDLSSNNLS GHIPSAISQL TFLNNLNLSS NQLSSAIPAE ICVGFGSAAH PDSEFIQHHG LLDLSYNRLT GNIPTAIKNC VMVTVLNLQG
601: NMLSGTIPPE LAELPNVTAI YLSYNTLVGP MLPCYLNYLD LSSNDFHGPA PCGICNVVGL TFANFSGNHI GMSGLADCAA EGFCTRKGFH RKALHSSDRV
701: RRAAIVCVSI LAVTVVLVLL VLYLRRKLLR SRPLALLPVS KAKATIEPTS SDELLGKKFQ EPLSINLATF EHSLLRVTAD DIQKATENFS MVHIIGDGGF
801: GTVYRAALPE GRRVAVKRLH GGHQFQGDRE FLAEMETIGK LLDGMPKRVY PLLFISELPS SVVRTYNILS HNDGGLWCHA SVMG

Best Arabidopsis Sequence Match ( AT1G17230.3 )
(BLAST)

001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PGE

Arabidopsis Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.