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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES03532 Sorghum plasma membrane 49.04 43.48
TraesCS3B01G550900.1 Wheat plasma membrane 45.22 41.46
TraesCS3D01G496100.1 Wheat plasma membrane 45.12 41.4
GSMUA_Achr6P35950_001 Banana plasma membrane 37.06 40.98
GSMUA_Achr4P08920_001 Banana plasma membrane, vacuole 36.35 40.88
TraesCS3B01G551200.1 Wheat plasma membrane 44.31 40.74
GSMUA_Achr1P05250_001 Banana golgi, plasma membrane 32.73 39.59
GSMUA_AchrUn_... Banana plasma membrane 31.12 38.43
TraesCS3A01G490100.1 Wheat plasma membrane 33.64 37.32
CDY41977 Canola plasma membrane 39.48 34.81
VIT_07s0031g01850.t01 Wine grape plasma membrane 41.99 34.61
CDX72702 Canola plasma membrane 39.27 34.54
CDY12143 Canola plasma membrane 37.06 34.39
KRH53813 Soybean plasma membrane 40.68 34.12
KRH64131 Soybean plasma membrane 40.68 34.04
AT4G39400.1 Thale cress plasma membrane, vacuole 40.89 33.95
Bra010684.1-P Field mustard plasma membrane 40.08 33.9
CDY53185 Canola plasma membrane 36.66 33.89
Solyc04g051510.1.1 Tomato golgi, plasma membrane, vacuole 41.09 33.8
Bra011862.1-P Field mustard plasma membrane 40.58 33.75
PGSC0003DMT400050728 Potato golgi, plasma membrane, vacuole 40.99 33.75
Bra033615.1-P Field mustard plasma membrane 40.38 33.58
CDX90332 Canola plasma membrane 37.16 33.36
CDY66903 Canola extracellular 13.6 32.37
CDY66904 Canola cytosol, peroxisome, plasma membrane 14.8 30.95
OQU92006 Sorghum plasma membrane 34.24 30.3
EER96489 Sorghum plasma membrane 36.15 29.57
OQU92491 Sorghum extracellular 20.54 29.48
EER99654 Sorghum plasma membrane 27.59 24.93
KXG23808 Sorghum plasma membrane 18.33 24.04
OQU79417 Sorghum plasma membrane 17.02 23.06
EES01957 Sorghum plasma membrane 29.31 22.51
EES06446 Sorghum plasma membrane 26.28 21.46
Protein Annotations
Gene3D:1.10.510.10MapMan:11.3.2.1.1MapMan:18.4.1.10.2MapMan:18.4.1.12Gene3D:3.30.1490.310Gene3D:3.30.200.20
UniProt:A0A1W0VXB3GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtypEnsemblPlants:OQU86764ProteinID:OQU86764ProteinID:OQU86764.1PFAM:PF00069PFAM:PF00560
PFAM:PF08263PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00109PFscan:PS50011
PFscan:PS51450PANTHER:PTHR27000PANTHER:PTHR27000:SF220InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00369
EnsemblPlantsGene:SORBI_3003G141200SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixInterPro:Tyr_kinase_AS
UniParc:UPI0009DC8F94SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:13766644..13770312
Molecular Weight (calculated)
108365.0 Da
IEP (calculated)
5.953
GRAVY (calculated)
0.076
Length
993 amino acids
Sequence
(BLAST)
001: MVSRYLMLML FFAVAAAAAV LDQDDLQLLE QFMAAVPNGT ALAGWNSSHG ACSFPGVRCK NHRVTSVSLT GVMLNADFSA VASTLLQLSS VESVTVRNAN
101: ISGMFSALRG VDCGEKLSFL DLSGNHISGE VPAFINCSRL EYLDLSGNLI SGSVAVGVLS GCSSLTSLNL SGNHLVGAFP ADISHLESLT TLNLSNNNFS
201: GEIPGNAFLH LPKLRTLNLS FNYFDGSIPE VVTMLPELEI LDLSSNLLSG IIPGTLCSTN TSSKLQVLYL QNNYLTGGIS EAISSCTGLV SLDLSLNYIN
301: GTIPSSLGML PGLRDLVLWQ NALDGEIPAS LSRMLSLEYL ILDYNALVGS IPSGLANCTE LKWMSLASNR LSGPLPTWLG QLVNLQVLRL GNNSFTGPIP
401: PELGDCRSLL WLDLSGNQLK GHIPSELAKQ SRTMAPITSS TRKFAYLRNG EQRNTYQCRG KGSLVDITGI RQSDLSRMPS KKACSFTRVY LVSTSNINCF
501: SFRFLDLSFN QLDSEIPKDL GSMNCLMIMN LGYNRLSGVI PAALAGAKLL QILDLSHNLL EGQIPSSFST MSLTEVDLSN NRLSGMVPEL GSLATFPASQ
601: FENNSGLCGF PLPLCKQSVA NTQQSKSHKR QAILTAGAMA VFSVSLFVCV AALLICLCQR KKSKIHNKAN EALRLQGNLF SIWNFDGGDV YKQIVEATEN
701: FDEKYCIGRG GHGSVYEATL QTGETFAVKK MRKTEDESMK NEEQFSREIV ALLQIRHRNI VKLYGYCRTD QDKFLVYEYM ERGSLSTILM ANASAVELDW
801: NKRLDIAKDV ANALYYLHHD CSTPIVHRDI TCNNILVDME FRACVSDFGL AKILNFDASS CTRIAGTTGY LAPELAYMTR VTEKCDVYSF GVVVLELFMG
901: SHPSDLLSDL ICTDKKSTSL EDLLDTRLPL PEPEAAREIF VFLTLALQCL DPNPANRPTM RSAIKKLSAE PITDDVDYLR ADLMGMDTPT HVH
Best Arabidopsis Sequence Match ( AT4G39400.1 )
(BLAST)
0001: MKTFSSFFLS VTTLFFFSFF SLSFQASPSQ SLYREIHQLI SFKDVLPDKN LLPDWSSNKN PCTFDGVTCR DDKVTSIDLS SKPLNVGFSA VSSSLLSLTG
0101: LESLFLSNSH INGSVSGFKC SASLTSLDLS RNSLSGPVTT LTSLGSCSGL KFLNVSSNTL DFPGKVSGGL KLNSLEVLDL SANSISGANV VGWVLSDGCG
0201: ELKHLAISGN KISGDVDVSR CVNLEFLDVS SNNFSTGIPF LGDCSALQHL DISGNKLSGD FSRAISTCTE LKLLNISSNQ FVGPIPPLPL KSLQYLSLAE
0301: NKFTGEIPDF LSGACDTLTG LDLSGNHFYG AVPPFFGSCS LLESLALSSN NFSGELPMDT LLKMRGLKVL DLSFNEFSGE LPESLTNLSA SLLTLDLSSN
0401: NFSGPILPNL CQNPKNTLQE LYLQNNGFTG KIPPTLSNCS ELVSLHLSFN YLSGTIPSSL GSLSKLRDLK LWLNMLEGEI PQELMYVKTL ETLILDFNDL
0501: TGEIPSGLSN CTNLNWISLS NNRLTGEIPK WIGRLENLAI LKLSNNSFSG NIPAELGDCR SLIWLDLNTN LFNGTIPAAM FKQSGKIAAN FIAGKRYVYI
0601: KNDGMKKECH GAGNLLEFQG IRSEQLNRLS TRNPCNITSR VYGGHTSPTF DNNGSMMFLD MSYNMLSGYI PKEIGSMPYL FILNLGHNDI SGSIPDEVGD
0701: LRGLNILDLS SNKLDGRIPQ AMSALTMLTE IDLSNNNLSG PIPEMGQFET FPPAKFLNNP GLCGYPLPRC DPSNADGYAH HQRSHGRRPA SLAGSVAMGL
0801: LFSFVCIFGL ILVGREMRKR RRKKEAELEM YAEGHGNSGD RTANNTNWKL TGVKEALSIN LAAFEKPLRK LTFADLLQAT NGFHNDSLIG SGGFGDVYKA
0901: ILKDGSAVAI KKLIHVSGQG DREFMAEMET IGKIKHRNLV PLLGYCKVGD ERLLVYEFMK YGSLEDVLHD PKKAGVKLNW STRRKIAIGS ARGLAFLHHN
1001: CSPHIIHRDM KSSNVLLDEN LEARVSDFGM ARLMSAMDTH LSVSTLAGTP GYVPPEYYQS FRCSTKGDVY SYGVVLLELL TGKRPTDSPD FGDNNLVGWV
1101: KQHAKLRISD VFDPELMKED PALEIELLQH LKVAVACLDD RAWRRPTMVQ VMAMFKEIQA GSGIDSQSTI RSIEDGGFST IEMVDMSIKE VPEGKL
Arabidopsis Description
BRI1Protein BRASSINOSTEROID INSENSITIVE 1 [Source:UniProtKB/Swiss-Prot;Acc:O22476]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.