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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d022044_P001 Maize plasma membrane 89.99 89.83
Os07t0597200-01 Rice plasma membrane 75.89 75.41
TraesCS2D01G190200.2 Wheat plasma membrane 75.61 74.86
TraesCS2B01G208900.1 Wheat plasma membrane 75.71 74.82
TraesCS2A01G182400.1 Wheat plasma membrane 75.16 74.41
HORVU2Hr1G034370.1 Barley plasma membrane 75.89 74.4
TraesCS2D01G053000.1 Wheat plasma membrane 52.5 57.24
KXG23808 Sorghum plasma membrane 37.85 54.95
OQU79417 Sorghum plasma membrane 36.21 54.3
VIT_17s0000g06710.t01 Wine grape plasma membrane 52.87 52.77
GSMUA_Achr3P18780_001 Banana cytosol 26.39 51.51
PGSC0003DMT400063400 Potato plasma membrane 51.23 51.51
Bra015917.1-P Field mustard cytosol 50.5 51.2
Solyc03g115610.2.1 Tomato plasma membrane 50.86 51.19
KRH03535 Soybean plasma membrane 50.77 51.15
AT1G74360.1 Thale cress plasma membrane 51.14 50.81
KRH63281 Soybean plasma membrane 50.32 50.78
CDX96537 Canola plasma membrane 50.68 49.64
CDX73079 Canola plasma membrane 50.5 49.51
KRH54609 Soybean plasma membrane 50.05 49.42
Solyc06g069650.2.1 Tomato plasma membrane 49.32 49.32
CDY66377 Canola cytosol, plastid, vacuole 18.65 49.28
CDY16355 Canola cytosol, plastid, vacuole 18.56 49.04
KRH56872 Soybean plasma membrane 51.14 48.66
PGSC0003DMT400083089 Potato plasma membrane 48.95 48.64
GSMUA_Achr6P16720_001 Banana plastid, vacuole 35.76 47.58
GSMUA_Achr10P... Banana plasma membrane, vacuole 37.58 46.93
CDY49128 Canola vacuole 17.38 46.81
Bra008139.1-P Field mustard cytosol 32.03 44.67
CDY42431 Canola plasma membrane 20.38 42.42
GSMUA_Achr6P23960_001 Banana cytosol 25.84 39.83
OQU92006 Sorghum plasma membrane 29.03 28.43
OQU86764 Sorghum plasma membrane 24.93 27.59
EER96489 Sorghum plasma membrane 30.3 27.43
EES03532 Sorghum plasma membrane 27.75 27.23
OQU92491 Sorghum extracellular 16.11 25.58
EES01957 Sorghum plasma membrane 28.12 23.9
EES06446 Sorghum plasma membrane 25.02 22.62
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.10.2MapMan:26.8.1.3.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8078997
UniProt:C5XD82EnsemblPlants:EER99654ProteinID:EER99654ProteinID:EER99654.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263PFAM:PF13516PFAM:PF13855
PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF54
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3002G363400SUPFAM:SSF52058
SUPFAM:SSF56112unigene:Sbi.2334InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A83CA9
RefSeq:XP_002463133.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:72452563..72456832
Molecular Weight (calculated)
118086.0 Da
IEP (calculated)
5.247
GRAVY (calculated)
-0.033
Length
1099 amino acids
Sequence
(BLAST)
0001: MYPLLLGFLV LLLVAGEVAA AVPTGAQQSN GDKEVLVELK RFLQNNNRVN RGAYDAWQES DASPCGWAGV RCDNASGRVT SLDLSGSSIS GPAFGNFSRL
0101: PELAELDLSD NTICAPGDID QCHGLVRLNL SHNLINGSLD LSGLTRLQTL DVSWNRLSGG VAANFTAMCA ADLAVFNVST NGLTGNVTGT FDGCARLEYV
0201: DLSSNNFTGE LWPGVARFRQ FSAAENNLTG SVPPATFPDG CKLESLDLSA NYLTGSFPDS IAKCANLTYL SLWGNGFSSF IPAGIGRLSA IETLVLGNNS
0301: FDRRIPLALT NCTKLQFLDI SSNKFGGDVQ DTFGKFPSLR YLVLHHNNYT GGIVTSGVLQ LPLLARLDLS YNEFSGELPP EVADMKSLKY LMLAYNQFSS
0401: GIPAAYGRLT ELQALDLSYN DLSGEIPATI GNLTSLLWLM LAGNQLSGDI PSEIGKCTSL LWLNLADNKL TGNIPPDMAN IGSNPGPTFA KNRNGSSVLA
0501: GSGDCQAMKR WIPASYPPFS FVYSIMTRAN CRSIWDRILK GYGIVPVCTN SSSPVRSYTI SGYVQLSRNQ LSGDIPPSIG AMVNLSLLHL DGNRLTGQLP
0601: PEISRLPLVV LNVSRNNISG AIPSEIGRML CLEIMDLSYN NFSGELPGSL SQLTELTKFN VSYNPLLTGS FPTTAQFGTF DEQSFLGDPL ISLGTGTGKQ
0701: PPPEAADARR RGMTPRSIAV WFLFSLLAAF VSGAFVFFMA NLRARFPVEQ DPDPESFSCE NPKCSSGKCS MQMSTTSSPP SGSSSSATGC SSSTEAVKVF
0801: QLGKTAFTYR DIVAATGNFS DDLVIGRGGY GVVYRGVLPD GRTVAVKKLA RPRDGDCERE FRAEMEVLAD RMGSSWPHPN LVTLYGWCLS GSAKILVYEY
0901: LDGGNLESLV GDTAAFGWGR RLDTAIGVAR ALVFLHHECR PAVVHRDVKA SNVLLDRDGR ARVTDFGLAR VVRPGDTHVS TVVAGTVGYV APEYGQTWRA
1001: TTKGDVYSYG VLLMELATGR RAVDGAEDEC LVEWGRRMGK EGWRSSSEKA AAVGTVSWEL LMLGMRCTAD APQERPDMPD VLAALLDVAE NSGAHLQFT
Best Arabidopsis Sequence Match ( AT1G74360.1 )
(BLAST)
0001: MTMVTRVIMT DDDSQSLCFL CFLLFFFITA IAVAGDSLDS DREVLLSLKS YLESRNPQNR GLYTEWKMEN QDVVCQWPGI ICTPQRSRVT GINLTDSTIS
0101: GPLFKNFSAL TELTYLDLSR NTIEGEIPDD LSRCHNLKHL NLSHNILEGE LSLPGLSNLE VLDLSLNRIT GDIQSSFPLF CNSLVVANLS TNNFTGRIDD
0201: IFNGCRNLKY VDFSSNRFSG EVWTGFGRLV EFSVADNHLS GNISASMFRG NCTLQMLDLS GNAFGGEFPG QVSNCQNLNV LNLWGNKFTG NIPAEIGSIS
0301: SLKGLYLGNN TFSRDIPETL LNLTNLVFLD LSRNKFGGDI QEIFGRFTQV KYLVLHANSY VGGINSSNIL KLPNLSRLDL GYNNFSGQLP TEISQIQSLK
0401: FLILAYNNFS GDIPQEYGNM PGLQALDLSF NKLTGSIPAS FGKLTSLLWL MLANNSLSGE IPREIGNCTS LLWFNVANNQ LSGRFHPELT RMGSNPSPTF
0501: EVNRQNKDKI IAGSGECLAM KRWIPAEFPP FNFVYAILTK KSCRSLWDHV LKGYGLFPVC SAGSTVRTLK ISAYLQLSGN KFSGEIPASI SQMDRLSTLH
0601: LGFNEFEGKL PPEIGQLPLA FLNLTRNNFS GEIPQEIGNL KCLQNLDLSF NNFSGNFPTS LNDLNELSKF NISYNPFISG AIPTTGQVAT FDKDSFLGNP
0701: LLRFPSFFNQ SGNNTRKISN QVLGNRPRTL LLIWISLALA LAFIACLVVS GIVLMVVKAS REAEIDLLDG SKTRHDMTSS SGGSSPWLSG KIKVIRLDKS
0801: TFTYADILKA TSNFSEERVV GRGGYGTVYR GVLPDGREVA VKKLQREGTE AEKEFRAEME VLSANAFGDW AHPNLVRLYG WCLDGSEKIL VHEYMGGGSL
0901: EELITDKTKL QWKKRIDIAT DVARGLVFLH HECYPSIVHR DVKASNVLLD KHGNARVTDF GLARLLNVGD SHVSTVIAGT IGYVAPEYGQ TWQATTRGDV
1001: YSYGVLTMEL ATGRRAVDGG EECLVEWARR VMTGNMTAKG SPITLSGTKP GNGAEQMTEL LKIGVKCTAD HPQARPNMKE VLAMLVKISG KAELFNGLSS
1101: QGYIEM
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Source:UniProtKB/Swiss-Prot;Acc:C0LGJ1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.