CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42431	Canola	plasma membrane	61.76	47.73
Bra008139.1-P	Field mustard	cytosol	83.82	43.4
AT1G74360.1	Thale cress	plasma membrane	75.0	27.67
CDX96537	Canola	plasma membrane	74.02	26.92
CDX73079	Canola	plasma membrane	73.77	26.85
Zm00001d041327_P002	Maize	mitochondrion	45.34	25.8
HORVU7Hr1G099370.4	Barley	cytosol	48.04	25.72
TraesCS7D01G424900.1	Wheat	plasma membrane	47.3	25.63
Os03t0400800-00	Rice	plasma membrane	47.06	25.5
GSMUA_Achr3P18780_001	Banana	cytosol	35.05	25.4
Os08t0322500-00	Rice	cytosol	44.85	24.93
KXG23808	Sorghum	plasma membrane	44.85	24.17
CDY16355	Canola	cytosol, plastid, vacuole	24.02	23.56
CDY66377	Canola	cytosol, plastid, vacuole	24.02	23.56
OQU79417	Sorghum	plasma membrane	40.69	22.65
VIT_17s0000g06710.t01	Wine grape	plasma membrane	56.62	20.98
PGSC0003DMT400063400	Potato	plasma membrane	55.88	20.86
Solyc03g115610.2.1	Tomato	plasma membrane	55.15	20.6
KRH03535	Soybean	plasma membrane	54.9	20.53
Solyc06g069650.2.1	Tomato	plasma membrane	52.94	19.65
PGSC0003DMT400083089	Potato	plasma membrane	52.94	19.53
KRH56872	Soybean	plasma membrane	54.17	19.13
KRH63281	Soybean	plasma membrane	50.74	19.01
TraesCS2D01G053000.1	Wheat	plasma membrane	46.57	18.85
KRH54609	Soybean	plasma membrane	50.49	18.51
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	39.22	18.18
Os07t0597200-01	Rice	plasma membrane	49.02	18.08
TraesCS2D01G190200.2	Wheat	plasma membrane	49.02	18.02
TraesCS2B01G208900.1	Wheat	plasma membrane	48.77	17.9
GSMUA_Achr6P23960_001	Banana	cytosol	30.88	17.67
TraesCS2A01G182400.1	Wheat	plasma membrane	48.04	17.66
Zm00001d022044_P001	Maize	plasma membrane	47.55	17.62
HORVU2Hr1G034370.1	Barley	plasma membrane	48.28	17.57
EER99654	Sorghum	plasma membrane	46.81	17.38
GSMUA_Achr6P16720_001	Banana	plastid, vacuole	35.05	17.31
CDY66903	Canola	extracellular	14.22	13.91
CDY12143	Canola	plasma membrane	32.35	12.34
CDY03088	Canola	plasma membrane	32.84	11.8
CDY24191	Canola	cytosol	15.69	11.79
CDY17621	Canola	plasma membrane	32.35	11.72
CDX90332	Canola	plasma membrane	31.62	11.66
CDY43996	Canola	plasma membrane	30.39	11.4
CDY23595	Canola	plasma membrane	30.15	11.29
CDY10547	Canola	plasma membrane	29.66	10.98
CDY42373	Canola	plasma membrane	31.13	10.9
CDX72702	Canola	plasma membrane	29.66	10.72
CDY41977	Canola	plasma membrane	28.68	10.39
CDY53185	Canola	plasma membrane	26.23	9.96
CDX70023	Canola	plasma membrane	13.24	6.46
CDX98990	Canola	plasma membrane	12.99	5.72
CDY66904	Canola	cytosol, peroxisome, plasma membrane	1.23	1.05
CDY24190	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A078IJ72	EnsemblPlants:CDY49128	ProteinID:CDY49128	ProteinID:CDY49128.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00092362001	InterPro:IPR001611	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019
PANTHER:PTHR27000	PANTHER:PTHR27000:SF54	SMART:SM00369	SUPFAM:SSF52047	UniParc:UPI0004EDFC73	SEG:seg

Description

BnaA02g16780DBnaA02g16780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ72]

Coordinates

chrLK032811:+:63439..70382

Molecular Weight (calculated)

45414.6 Da

IEP (calculated)

7.406

GRAVY (calculated)

0.085

Length

408 amino acids

Sequence
(BLAST)

001: MLQTWRKIPY FLIVPEELHF YRVTGISLRD STISGPLFGN FSALTHLTFL DLSSNTIGGS IPDDLSRCHS LKYLNLSKNI IGGELSLSGL SNLEVLDLSV
101: NKISGDVHST FPSICNSLVV ANLSTNNFSG RIDDVFNECR YLKYVDLRYN RFSGEIWSGF RRLVKFSVSG NRLSGNISAS MFRGNCTLQV LDLSGNEFVG
201: EFPGQVSNCQ NLNVLDLWGN NFRGNIPAEI GSISSLRGLY FGKNEFSRDI PETLLNLSNL VLQALDLSFN RLTGSIPASF GNLTSLLWLM LANNSLSGEI
301: PREIGNCSSL FMLHLGFNEF EGKLPIEIGL LPLAFLNLTR NKFSGQIPQE IGNLSSLQNL DLSYNNFSGN FPTIKLTNVD HTTFKCFLSS RRLIFIVELC
401: VSVRTFKF

Best Arabidopsis Sequence Match ( AT1G74360.1 )
(BLAST)

0001: MTMVTRVIMT DDDSQSLCFL CFLLFFFITA IAVAGDSLDS DREVLLSLKS YLESRNPQNR GLYTEWKMEN QDVVCQWPGI ICTPQRSRVT GINLTDSTIS
0101: GPLFKNFSAL TELTYLDLSR NTIEGEIPDD LSRCHNLKHL NLSHNILEGE LSLPGLSNLE VLDLSLNRIT GDIQSSFPLF CNSLVVANLS TNNFTGRIDD
0201: IFNGCRNLKY VDFSSNRFSG EVWTGFGRLV EFSVADNHLS GNISASMFRG NCTLQMLDLS GNAFGGEFPG QVSNCQNLNV LNLWGNKFTG NIPAEIGSIS
0301: SLKGLYLGNN TFSRDIPETL LNLTNLVFLD LSRNKFGGDI QEIFGRFTQV KYLVLHANSY VGGINSSNIL KLPNLSRLDL GYNNFSGQLP TEISQIQSLK
0401: FLILAYNNFS GDIPQEYGNM PGLQALDLSF NKLTGSIPAS FGKLTSLLWL MLANNSLSGE IPREIGNCTS LLWFNVANNQ LSGRFHPELT RMGSNPSPTF
0501: EVNRQNKDKI IAGSGECLAM KRWIPAEFPP FNFVYAILTK KSCRSLWDHV LKGYGLFPVC SAGSTVRTLK ISAYLQLSGN KFSGEIPASI SQMDRLSTLH
0601: LGFNEFEGKL PPEIGQLPLA FLNLTRNNFS GEIPQEIGNL KCLQNLDLSF NNFSGNFPTS LNDLNELSKF NISYNPFISG AIPTTGQVAT FDKDSFLGNP
0701: LLRFPSFFNQ SGNNTRKISN QVLGNRPRTL LLIWISLALA LAFIACLVVS GIVLMVVKAS REAEIDLLDG SKTRHDMTSS SGGSSPWLSG KIKVIRLDKS
0801: TFTYADILKA TSNFSEERVV GRGGYGTVYR GVLPDGREVA VKKLQREGTE AEKEFRAEME VLSANAFGDW AHPNLVRLYG WCLDGSEKIL VHEYMGGGSL
0901: EELITDKTKL QWKKRIDIAT DVARGLVFLH HECYPSIVHR DVKASNVLLD KHGNARVTDF GLARLLNVGD SHVSTVIAGT IGYVAPEYGQ TWQATTRGDV
1001: YSYGVLTMEL ATGRRAVDGG EECLVEWARR VMTGNMTAKG SPITLSGTKP GNGAEQMTEL LKIGVKCTAD HPQARPNMKE VLAMLVKISG KAELFNGLSS
1101: QGYIEM

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Source:UniProtKB/Swiss-Prot;Acc:C0LGJ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.