CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid, vacuole
Any Predictor:	cytosol, plastid, vacuole
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66377	Canola	cytosol, plastid, vacuole	97.36	97.36
CDY42431	Canola	plasma membrane	36.78	28.98
GSMUA_Achr3P18780_001	Banana	cytosol	37.02	27.35
AT1G74360.1	Thale cress	plasma membrane	69.23	26.04
CDX73079	Canola	plasma membrane	67.07	24.89
CDX96537	Canola	plasma membrane	66.83	24.78
TraesCS7D01G424900.1	Wheat	plasma membrane	43.99	24.3
CDY49128	Canola	vacuole	23.56	24.02
HORVU7Hr1G099370.4	Barley	cytosol	43.51	23.75
Os08t0322500-00	Rice	cytosol	41.83	23.71
Zm00001d041327_P002	Maize	mitochondrion	40.62	23.57
Os03t0400800-00	Rice	plasma membrane	40.87	22.58
KXG23808	Sorghum	plasma membrane	40.87	22.46
GSMUA_Achr6P23960_001	Banana	cytosol	37.02	21.6
VIT_17s0000g06710.t01	Wine grape	plasma membrane	55.77	21.07
PGSC0003DMT400063400	Potato	plasma membrane	54.81	20.86
Solyc03g115610.2.1	Tomato	plasma membrane	54.33	20.7
OQU79417	Sorghum	plasma membrane	36.3	20.6
KRH03535	Soybean	plasma membrane	53.37	20.35
Solyc06g069650.2.1	Tomato	plasma membrane	52.88	20.02
PGSC0003DMT400083089	Potato	plasma membrane	52.88	19.89
KRH63281	Soybean	plasma membrane	51.92	19.83
KRH54609	Soybean	plasma membrane	51.68	19.32
KRH56872	Soybean	plasma membrane	53.12	19.13
EER99654	Sorghum	plasma membrane	49.04	18.56
Os07t0597200-01	Rice	plasma membrane	49.28	18.54
TraesCS2D01G190200.2	Wheat	plasma membrane	49.28	18.47
TraesCS2B01G208900.1	Wheat	plasma membrane	49.04	18.35
TraesCS2D01G053000.1	Wheat	plasma membrane	44.23	18.25
TraesCS2A01G182400.1	Wheat	plasma membrane	48.32	18.11
Zm00001d022044_P001	Maize	plasma membrane	47.84	18.07
HORVU2Hr1G034370.1	Barley	plasma membrane	47.12	17.48
GSMUA_Achr6P16720_001	Banana	plastid, vacuole	34.13	17.19
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	35.82	16.93
CDX70023	Canola	plasma membrane	23.08	11.48
CDY66903	Canola	extracellular	11.3	11.27
CDY41977	Canola	plasma membrane	27.4	10.12
CDY53185	Canola	plasma membrane	25.72	9.96
CDY24191	Canola	cytosol	12.98	9.94
CDY43996	Canola	plasma membrane	25.96	9.93
CDY23595	Canola	plasma membrane	25.96	9.92
CDY17621	Canola	plasma membrane	25.72	9.5
CDX72702	Canola	plasma membrane	25.72	9.48
CDY03088	Canola	plasma membrane	25.72	9.42
CDY42373	Canola	plasma membrane	25.96	9.27
CDY12143	Canola	plasma membrane	23.8	9.25
CDX98990	Canola	plasma membrane	20.43	9.18
CDY10547	Canola	plasma membrane	24.28	9.17
CDX90332	Canola	plasma membrane	22.84	8.59
CDY66904	Canola	cytosol, peroxisome, plasma membrane	6.49	5.68
CDY24190	Canola	cytosol	0.96	2.6

Protein Annotations

MapMan:26.8.1.3.1	Gene3D:3.80.10.10	GO:A0A078FPG1	UniProt:A0A078FPG1	EnsemblPlants:CDY16355	ProteinID:CDY16355
ProteinID:CDY16355.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00090884001	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13516	PFAM:PF13855	PANTHER:PTHR27000	PANTHER:PTHR27000:SF54
SMART:SM00369	SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI0004EF13BB	:	:

Description

BnaA02g11590DBnaA02g11590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPG1]

Coordinates

chrLK032063:+:133293..134543

Molecular Weight (calculated)

46266.5 Da

IEP (calculated)

5.403

GRAVY (calculated)

-0.029

Length

416 amino acids

Sequence
(BLAST)

001: MLHNLYRLDL SFNNFSGTLP AEISQIKSLK FLILAYNNFS GGIPHEYGNM LALQVLDLSF NRLTGSIPAS FGKLTSLLWL MLDSNSLSGE IPQEIGNCTS
101: LLWFNVANNK LSGGFHPKLT NMGSNPFPTF EVNRQSNDSI IIAATGECME LTRWIPVKFP PFLFIYAILT KKNCRSLWRH ILEGEGLFPG CAAGLMAHTL
201: EIPAYLQLSG NKISGEIPAS ISQMERLSML HLGFNEFEGR LPPEIGKLPL SFLNLTHNNF SGQLPQEVGN LKCLRNLDLS WNNFSGAFPK SLNDLNELST
301: FNISYNPLIS GVIPVSGQLS TFEKASFLGN PLLQFPTSFD RSGNNTSSEE PDNERKGEEE DDEDTIDMSV FYWSTSSTYV AALIGIAALM YFDCPLHRAW
401: FRLVNAFIAS AKRMLS

Best Arabidopsis Sequence Match ( AT1G74360.1 )
(BLAST)

0001: MTMVTRVIMT DDDSQSLCFL CFLLFFFITA IAVAGDSLDS DREVLLSLKS YLESRNPQNR GLYTEWKMEN QDVVCQWPGI ICTPQRSRVT GINLTDSTIS
0101: GPLFKNFSAL TELTYLDLSR NTIEGEIPDD LSRCHNLKHL NLSHNILEGE LSLPGLSNLE VLDLSLNRIT GDIQSSFPLF CNSLVVANLS TNNFTGRIDD
0201: IFNGCRNLKY VDFSSNRFSG EVWTGFGRLV EFSVADNHLS GNISASMFRG NCTLQMLDLS GNAFGGEFPG QVSNCQNLNV LNLWGNKFTG NIPAEIGSIS
0301: SLKGLYLGNN TFSRDIPETL LNLTNLVFLD LSRNKFGGDI QEIFGRFTQV KYLVLHANSY VGGINSSNIL KLPNLSRLDL GYNNFSGQLP TEISQIQSLK
0401: FLILAYNNFS GDIPQEYGNM PGLQALDLSF NKLTGSIPAS FGKLTSLLWL MLANNSLSGE IPREIGNCTS LLWFNVANNQ LSGRFHPELT RMGSNPSPTF
0501: EVNRQNKDKI IAGSGECLAM KRWIPAEFPP FNFVYAILTK KSCRSLWDHV LKGYGLFPVC SAGSTVRTLK ISAYLQLSGN KFSGEIPASI SQMDRLSTLH
0601: LGFNEFEGKL PPEIGQLPLA FLNLTRNNFS GEIPQEIGNL KCLQNLDLSF NNFSGNFPTS LNDLNELSKF NISYNPFISG AIPTTGQVAT FDKDSFLGNP
0701: LLRFPSFFNQ SGNNTRKISN QVLGNRPRTL LLIWISLALA LAFIACLVVS GIVLMVVKAS REAEIDLLDG SKTRHDMTSS SGGSSPWLSG KIKVIRLDKS
0801: TFTYADILKA TSNFSEERVV GRGGYGTVYR GVLPDGREVA VKKLQREGTE AEKEFRAEME VLSANAFGDW AHPNLVRLYG WCLDGSEKIL VHEYMGGGSL
0901: EELITDKTKL QWKKRIDIAT DVARGLVFLH HECYPSIVHR DVKASNVLLD KHGNARVTDF GLARLLNVGD SHVSTVIAGT IGYVAPEYGQ TWQATTRGDV
1001: YSYGVLTMEL ATGRRAVDGG EECLVEWARR VMTGNMTAKG SPITLSGTKP GNGAEQMTEL LKIGVKCTAD HPQARPNMKE VLAMLVKISG KAELFNGLSS
1101: QGYIEM

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Source:UniProtKB/Swiss-Prot;Acc:C0LGJ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.