Factsheet for VIT_17s0000g06710.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 7
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063400	Potato	plasma membrane	65.3	65.78
Solyc03g115610.2.1	Tomato	plasma membrane	64.94	65.48
KRH03535	Soybean	plasma membrane	63.94	64.53
Bra015917.1-P	Field mustard	cytosol	61.58	62.55
AT1G74360.1	Thale cress	plasma membrane	62.4	62.12
Solyc06g069650.2.1	Tomato	plasma membrane	61.49	61.6
PGSC0003DMT400083089	Potato	plasma membrane	61.58	61.3
CDX73079	Canola	plasma membrane	62.22	61.11
CDX96537	Canola	plasma membrane	62.13	60.96
KRH56872	Soybean	plasma membrane	63.12	60.17
KRH63281	Soybean	plasma membrane	59.13	59.78
KRH54609	Soybean	plasma membrane	59.85	59.21
CDY49128	Canola	vacuole	20.98	56.62
Bra008139.1-P	Field mustard	cytosol	40.24	56.22
CDY16355	Canola	cytosol, plastid, vacuole	21.07	55.77
CDY66377	Canola	cytosol, plastid, vacuole	20.98	55.53
CDY42431	Canola	plasma membrane	26.52	55.3
Os07t0597200-01	Rice	plasma membrane	54.41	54.16
GSMUA_Achr3P18780_001	Banana	cytosol	27.34	53.46
EER99654	Sorghum	plasma membrane	52.77	52.87
HORVU2Hr1G034370.1	Barley	plasma membrane	53.32	52.36
TraesCS2B01G208900.1	Wheat	plasma membrane	52.86	52.34
TraesCS2D01G190200.2	Wheat	plasma membrane	52.68	52.25
TraesCS2A01G182400.1	Wheat	plasma membrane	52.68	52.25
Zm00001d022044_P001	Maize	plasma membrane	52.13	52.13
GSMUA_Achr6P16720_001	Banana	plastid, vacuole	36.69	48.91
GSMUA_Achr10P...	Banana	plasma membrane, vacuole	38.33	47.95
Zm00001d041327_P002	Maize	mitochondrion	31.06	47.7
Os03t0400800-00	Rice	plasma membrane	31.88	46.61
Os08t0322500-00	Rice	cytosol	30.97	46.46
KXG23808	Sorghum	plasma membrane	31.61	45.97
TraesCS7D01G424900.1	Wheat	plasma membrane	31.34	45.82
OQU79417	Sorghum	plasma membrane	30.06	45.16
HORVU7Hr1G099370.4	Barley	cytosol	30.79	44.49
TraesCS2D01G053000.1	Wheat	plasma membrane	40.51	44.25
GSMUA_Achr6P23960_001	Banana	cytosol	26.79	41.37
VIT_05s0124g00650.t01	Wine grape	extracellular	2.45	32.53
VIT_08s0040g01540.t01	Wine grape	cytosol, plasma membrane, plastid	15.62	32.39
VIT_07s0031g01850.t01	Wine grape	plasma membrane	32.97	30.12
VIT_01s0011g06410.t01	Wine grape	plasma membrane	30.79	29.89
VIT_19s0015g01890.t01	Wine grape	plasma membrane	31.34	28.49
VIT_16s0100g00710.t01	Wine grape	plasma membrane	31.52	26.67
VIT_13s0084g00570.t01	Wine grape	plasma membrane	28.07	25.77
VIT_05s0062g01100.t01	Wine grape	plasma membrane	29.06	24.79

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100258690	wikigene:100258690	MapMan:18.4.1.10.2	MapMan:26.8.1.3.1	Gene3D:3.30.200.20
Gene3D:3.80.10.10	ProteinID:CCB43063	ProteinID:CCB43063.1	ncoils:Coil	UniProt:F6GT54	EMBL:FN594950
GO:GO:0000166	GO:GO:0002215	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009791
GO:GO:0009825	GO:GO:0009845	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016049
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0040007	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100258690	wikigene:LOC100258690	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13516
PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000
PANTHER:PTHR27000:SF54	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000210977A	ArrayExpress:VIT_17s0000g06710
EnsemblPlantsGene:VIT_17s0000g06710	EnsemblPlants:VIT_17s0000g06710.t01	unigene:Vvi.7899	RefSeq:XP_002281604	RefSeq:XP_002281604.2	SEG:seg

Description

No Description!

Coordinates

chr17:+:7307383..7310942

Molecular Weight (calculated)

120705.0 Da

IEP (calculated)

5.722

GRAVY (calculated)

-0.044

Length

1101 amino acids

Sequence
(BLAST)

0001: MRDEETDIRV VGLMISLVLI TGRIVAGDSL ETDREVLLSL KKFLEDNNQV NRGRYQEWNL SSWNPCDWPG ILCSNDGRVI SVNLSDNSIS GEIFHNFSAL
0101: TKLSHLDLSK NTLGGRIPAD LRRCESLVYL NLSHNIINDE LNLTGLKSLE VLDLSINRIG GEIQLTFPAV CDRLVLANIS ENNFTGSIDN CFDECKSLKY
0201: LDLSSNNFSG EIWQGFARLQ QFSASENRFG GVVSPSIFGG VCALGLLELS KNSFGGEVPG EIANCTSLRI LNLWGNHFTG PIPPELGSLS SLEGLFLGNN
0301: NFSRQVPESL LNLSSLAFLD LSKNNFGGEI QEIFGKFKQV RFLVLHTNSY TGGIYSSGIL KLSNISRLDL SFNNFSGPLP VELSEMPSLE FLILAHNQFS
0401: GSIPPEFGNI RRLQALDLSF NSLNGSIPST IGKLNSLLWL MLANNRFSGE IPPEIGNCTS LLWLNLANNQ FSGKIPPELT TIGRNPFPTF EMNRKNRGIP
0501: AGSGECQVMM RWIPANYPPF SFAYTLLTRR SCRSLWDNLL KGHGLFPMCL TGSKVRTLQI SGYVQISGNQ FSGEVPPEIR NMQNFSLIQM AANKFYGKLP
0601: PAIGQLPVVV LNLSENNFSG EIPMEIGNLG CLQNLDLSSN NFSGTFPTSL NNLSELNKFN ISYNPLISGV IPSTGQLATF EKESFLGDPL LVLPPFIGNP
0701: SNHPPPTAKS DGKPKQKFTS AFVFLTLTVA FIMCGLVSLL VCVLLKNPVD SSGYLLDDSK YRHDFASSSE VSSPWLSGAV KVIRLDKTAF TYADILMATC
0801: NFSDSRIIGK GGFGTVYRGV LPDGREVAVK KLQRDGIEGE KEFRAEMEVL SGNGLGWPHP NLVTLYGWCL NGSEKLLVYE YMEGGSLEDL ISDRMRLTWR
0901: RRLDVAIDVA RALVFLHHEC FTAIVHRDVK ASNVLLDRNG KARVTDFGLA RVVDDGNSHV STMVAGTVGY VAPEYGQTGQ ATTKGDVYSF GVLSMELATG
1001: RHALDGGEEC LVEWARRVMG NGRQGLSRAV IPVVMLGSGL AEGAEEMREL LRIGIKCTAE SPQARPNMKE VLAMLITILS TQQDFSYGSS PPSSEMSGLE
1101: T

Best Arabidopsis Sequence Match ( AT1G74360.1 )
(BLAST)

0001: MTMVTRVIMT DDDSQSLCFL CFLLFFFITA IAVAGDSLDS DREVLLSLKS YLESRNPQNR GLYTEWKMEN QDVVCQWPGI ICTPQRSRVT GINLTDSTIS
0101: GPLFKNFSAL TELTYLDLSR NTIEGEIPDD LSRCHNLKHL NLSHNILEGE LSLPGLSNLE VLDLSLNRIT GDIQSSFPLF CNSLVVANLS TNNFTGRIDD
0201: IFNGCRNLKY VDFSSNRFSG EVWTGFGRLV EFSVADNHLS GNISASMFRG NCTLQMLDLS GNAFGGEFPG QVSNCQNLNV LNLWGNKFTG NIPAEIGSIS
0301: SLKGLYLGNN TFSRDIPETL LNLTNLVFLD LSRNKFGGDI QEIFGRFTQV KYLVLHANSY VGGINSSNIL KLPNLSRLDL GYNNFSGQLP TEISQIQSLK
0401: FLILAYNNFS GDIPQEYGNM PGLQALDLSF NKLTGSIPAS FGKLTSLLWL MLANNSLSGE IPREIGNCTS LLWFNVANNQ LSGRFHPELT RMGSNPSPTF
0501: EVNRQNKDKI IAGSGECLAM KRWIPAEFPP FNFVYAILTK KSCRSLWDHV LKGYGLFPVC SAGSTVRTLK ISAYLQLSGN KFSGEIPASI SQMDRLSTLH
0601: LGFNEFEGKL PPEIGQLPLA FLNLTRNNFS GEIPQEIGNL KCLQNLDLSF NNFSGNFPTS LNDLNELSKF NISYNPFISG AIPTTGQVAT FDKDSFLGNP
0701: LLRFPSFFNQ SGNNTRKISN QVLGNRPRTL LLIWISLALA LAFIACLVVS GIVLMVVKAS REAEIDLLDG SKTRHDMTSS SGGSSPWLSG KIKVIRLDKS
0801: TFTYADILKA TSNFSEERVV GRGGYGTVYR GVLPDGREVA VKKLQREGTE AEKEFRAEME VLSANAFGDW AHPNLVRLYG WCLDGSEKIL VHEYMGGGSL
0901: EELITDKTKL QWKKRIDIAT DVARGLVFLH HECYPSIVHR DVKASNVLLD KHGNARVTDF GLARLLNVGD SHVSTVIAGT IGYVAPEYGQ TWQATTRGDV
1001: YSYGVLTMEL ATGRRAVDGG EECLVEWARR VMTGNMTAKG SPITLSGTKP GNGAEQMTEL LKIGVKCTAD HPQARPNMKE VLAMLVKISG KAELFNGLSS
1101: QGYIEM

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Source:UniProtKB/Swiss-Prot;Acc:C0LGJ1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.