CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
EES03532
EES12871
OQU86764

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	EES03532	AT4G39400.1	18653891
AT4G35230.1	OQU86764	AT4G39400.1	18653891
AT4G35230.1	EES12871	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0542800-01	Rice	cytosol, plasma membrane	18.11	65.05
HORVU1Hr1G052420.3	Barley	cytosol	31.89	46.64
GSMUA_Achr11P...	Banana	cytosol	35.41	38.53
EER94565	Sorghum	plastid	43.78	30.92
EER95565	Sorghum	plastid	42.43	30.43
VIT_03s0038g03270.t01	Wine grape	cytosol	40.81	30.2
KRH14029	Soybean	cytosol	40.54	30.18
TraesCS1A01G203400.1	Wheat	plastid	42.7	30.15
TraesCS1B01G217500.1	Wheat	plastid	42.7	30.04
TraesCS1D01G206900.1	Wheat	plastid	42.7	29.98
CDX69121	Canola	cytosol	40.81	29.84
CDX75483	Canola	cytosol	40.81	29.61
CDY17529	Canola	cytosol	40.54	29.59
Bra011596.1-P	Field mustard	cytosol	40.81	29.49
AT4G35230.1	Thale cress	cytosol	40.81	29.49
CDX76321	Canola	cytosol	40.27	29.39
Bra020806.1-P	Field mustard	cytosol	40.27	29.39
GSMUA_Achr5P11610_001	Banana	cytosol	39.73	29.28
KRH74087	Soybean	mitochondrion	40.27	29.27
GSMUA_Achr4P29650_001	Banana	cytosol	39.19	28.88
GSMUA_Achr5P19040_001	Banana	plasma membrane	39.73	28.21
HORVU1Hr1G052350.2	Barley	plastid	42.43	27.84
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	38.11	27.49
EER94456	Sorghum	cytosol	33.51	24.55
EES11678	Sorghum	cytosol	29.46	22.24
GSMUA_Achr1P02160_001	Banana	cytosol	28.11	19.19
OQU90700	Sorghum	plastid	24.32	18.33
HORVU0Hr1G000450.1	Barley	plastid	10.54	13.93
Bra034987.1-P	Field mustard	cytosol	4.32	9.88

Protein Annotations

Gene3D:1.25.40.10	Gene3D:3.30.430.20	MapMan:35.1	UniProt:A0A1Z5R597	InterPro:GNK2	InterPro:GNK2_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR002902	InterPro:IPR011990	InterPro:IPR038408	EnsemblPlants:OQU78897	ProteinID:OQU78897	ProteinID:OQU78897.1
PFscan:PS51473	PANTHER:PTHR32099	PANTHER:PTHR32099:SF21	EnsemblPlantsGene:SORBI_3008G069000	SUPFAM:SSF48452	TMHMM:TMhelix
InterPro:TPR-like_helical_dom_sf	UniParc:UPI000B8BAF2A	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:8193519..8195399

Molecular Weight (calculated)

41145.1 Da

IEP (calculated)

5.514

GRAVY (calculated)

-0.178

Length

370 amino acids

Sequence
(BLAST)

001: MSRAPIEREI LGTSVVGLVR AVAVETAKSA ARFAIAQQEI VGAANGYTIY AFAQCIPRVT RDCEFCLEDL ISSANMFLRT SVGGESSALW CQFRWELYPF
101: ITGVTPMFIN GVSPTPAEGK HGSSSEHQWK RNFVILSVVV GSAVLAILIV SAIVWSVQRL RNKRLHRHSS TTTPAGERLE CMETTSLEKK CPETGEGSSS
201: KVPESSMLGT PKPVEESMGD ACSRMDLSAI HQILVTRDYR DDEGSTELSF EGWTQQARDV LDARKRGDSA FECRRYEIAI NGYSEFVDAG TTVSPTVFIR
301: RSLCYLMCDK PEAALRDAML AQSFCPEWPT VFYMQSVALS KMNMQSDAVD MLNEAYQLEE MRRQTSTQLR

Best Arabidopsis Sequence Match ( AT1G50990.1 )
(BLAST)

001: MGCCQSSFLK PSSLHDKKIT SDDLSGRRGK GAKRGNRHRH ANINEGRGWH FSDVPDFSEF SASVLRDATN NFNKNAVVSV CSDQEPNLVY QGCIRSDKDK
101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD
201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED
301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI
401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI
501: LEDKRGS

Arabidopsis Description

BSK11Serine/threonine-protein kinase BSK11 [Source:UniProtKB/Swiss-Prot;Acc:F4I7Y4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.