Factsheet for GSMUA_Achr1P02160_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001
GSMUA_Achr4P08920_001
GSMUA_Achr6P19930_001
GSMUA_Achr6P35950_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	GSMUA_Achr1P05250_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr4P08920_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P35950_001	AT4G39400.1	18653891
AT4G35230.1	GSMUA_AchrUn_...	AT4G39400.1	18653891
AT4G35230.1	GSMUA_Achr6P19930_001	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	41.88	66.76
GSMUA_Achr5P11610_001	Banana	cytosol	61.44	66.33
GSMUA_Achr4P29650_001	Banana	cytosol	59.04	63.74
HORVU0Hr1G000450.1	Barley	plastid	31.55	61.07
GSMUA_Achr5P19040_001	Banana	plasma membrane	58.49	60.84
Zm00001d048345_P003	Maize	plastid	57.01	60.59
VIT_03s0038g03270.t01	Wine grape	cytosol	55.72	60.4
CDX69121	Canola	cytosol	55.54	59.49
Bra020806.1-P	Field mustard	cytosol	55.54	59.37
CDX76321	Canola	cytosol	55.54	59.37
Zm00001d027523_P001	Maize	plasma membrane	55.9	59.18
CDY17529	Canola	cytosol	55.35	59.17
EER95565	Sorghum	plastid	56.27	59.11
CDX75483	Canola	cytosol	55.54	59.02
Bra011596.1-P	Field mustard	cytosol	55.54	58.79
AT4G35230.1	Thale cress	cytosol	55.54	58.79
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	55.54	58.67
KRH14029	Soybean	cytosol	53.51	58.35
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	55.35	58.25
KRH74087	Soybean	mitochondrion	54.43	57.96
TraesCS1A01G203400.1	Wheat	plastid	55.54	57.44
TraesCS4B01G328200.1	Wheat	plastid	55.35	57.36
TraesCS5A01G500000.1	Wheat	plastid	55.35	57.25
Os03t0132800-01	Rice	plasma membrane	56.09	57.25
TraesCS1B01G217500.1	Wheat	plastid	55.35	57.03
TraesCS1D01G206900.1	Wheat	plastid	55.35	56.93
TraesCS4D01G325200.1	Wheat	plastid	54.61	56.81
EER94565	Sorghum	plastid	54.06	55.92
HORVU1Hr1G052350.2	Barley	plastid	55.17	53.01
Zm00001d029785_P001	Maize	plastid	54.06	52.6
HORVU1Hr1G052420.3	Barley	cytosol	24.17	51.78
GSMUA_Achr1P15240_001	Banana	cytosol	44.28	48.78
GSMUA_Achr8P02400_001	Banana	plastid	42.44	46.84
GSMUA_Achr11P...	Banana	cytosol	42.44	46.75
GSMUA_Achr10P...	Banana	mitochondrion, plastid	42.44	46.37
GSMUA_Achr4P05600_001	Banana	cytosol	41.7	46.03
GSMUA_Achr4P12250_001	Banana	cytosol	42.25	45.8
Bra034987.1-P	Field mustard	cytosol	12.55	41.98
Os10t0542800-01	Rice	cytosol, plasma membrane	7.2	37.86
OQU78897	Sorghum	cytosol, golgi, plastid	19.19	28.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.3.2.1.5	MapMan:18.4.1.42	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr1G02160_001	EnsemblPlants:GSMUA_Achr1P02160_001	EnsemblPlants:GSMUA_Achr1T02160_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0RWC4
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF56112
UniParc:UPI000296D22D	SEG:seg	:	:	:	:

Description

Probable serine/threonine-protein kinase At4g35230 [Source:GMGC_GENE;Acc:GSMUA_Achr1G02160_001]

Coordinates

chr1:-:1759591..1766813

Molecular Weight (calculated)

61789.0 Da

IEP (calculated)

6.391

GRAVY (calculated)

-0.238

Length

542 amino acids

Sequence
(BLAST)

001: MLEAPRFIDR LTQVNCIIFS LDFQLPNSRG LSYDYCNFFF FFLTKYIEPP EPPPPAAPPH VLVASACGDR EVPTFSQFAL AELKAATNGF NPHNVVSESG
101: DKALSVFYTG WLQNRRWIAV KKFTRTASPD PNQQMFYWDL QDEAWGVGKL RHRRLANLIG YRCDGEERLL VAEYMPNDTL AKHLLRYTYA HYGENQTIER
201: AMRLRVAFYI AEALEYCSNE GRPLYHDLNA YRVLFYEDGD PRLSCFGLMK NSRDRKSYST NLAYTPPEYL GNGRATPETV MFSFGTVVLD LLSGKCIPPT
301: HVCFSFIFCR ERSVLMDSHL EGNFSIEEAT TLVYLASQCF LHYEPRDQPN SKKLVVTLGP LQTKLEVPSF IMLGIEKREE APPAPHQPLS PMGEACSRMD
401: LIAIHQILVM TYYRVDEVTN ELSFQEWTQQ IRDMQGSEFI DVGALISPTK YARRSLCHLK CDQADVALRD AMQAQCLYPD CAGQAEHAER LPRRVAGSSG
501: TGREEAEEWQ RSTMQLLYVV VIVSSHYVKS VICPGKMCCI VF

Best Arabidopsis Sequence Match ( AT1G50990.1 )
(BLAST)

001: MGCCQSSFLK PSSLHDKKIT SDDLSGRRGK GAKRGNRHRH ANINEGRGWH FSDVPDFSEF SASVLRDATN NFNKNAVVSV CSDQEPNLVY QGCIRSDKDK
101: RLIAVKKFSK TTWPDPKQFA TEARAIGSLR HVRLVNLIGY CCEGDERLLV SEYMPNESLT KHLFHWEKQT MEWAMRLRVA LYVAEALEYC RQSGLKLYHD
201: LNTCRVLFDE NGSPRLSCFG WMKNSKDGKN FSTNLAYTPP EYLRSGTLIP ESVVFSFGTF LLDLLSGKHI PPSHAVGTIQ KQNLNVLMDS HLEGNYPEED
301: AAMVFDLASK CLHNNPNERP EIGDIISVIT TLQQKLDVPS YTMLGISKLE KLEMEHPKSL IYDACHQMDL AALHQILEAM EYKEDEVTCE LSFQQWAQQI
401: KDVCNTRQQG DSAFRNKHFE SAIDKYTQFI EIGIMISPTV YARRSMCYLF CDQPDAALRD AMQAQCVYSD WPTAFYLQAV ALSKLNMVED SATMLKEALI
501: LEDKRGS

Arabidopsis Description

BSK11Serine/threonine-protein kinase BSK11 [Source:UniProtKB/Swiss-Prot;Acc:F4I7Y4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.