Factsheet for Zm00001d027523_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
plasma membrane: 23508561
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d002287_P001
Zm00001d011721_P001
Zm00001d014769_P001
Zm00001d043634_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G35230.1	Zm00001d011721_P001	AT4G39400.1	18653891
AT4G35230.1	Zm00001d014769_P001	AT4G39400.1	18653891
AT4G35230.1	Zm00001d043634_P001	AT4G39400.1	18653891
AT4G35230.1	Zm00001d002287_P001	AT5G46330.1	23532072

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048345_P003	Maize	plastid	94.53	94.9
EER95565	Sorghum	plastid	95.31	94.57
GSMUA_Achr11P...	Banana	cytosol	57.03	85.88
HORVU4Hr1G081600.1	Barley	mitochondrion, plastid	84.96	84.47
Os03t0132800-01	Rice	plasma membrane	86.33	83.24
TraesCS4B01G328200.1	Wheat	plastid	84.77	82.98
TraesCS5A01G500000.1	Wheat	plastid	84.57	82.63
TraesCS4D01G325200.1	Wheat	plastid	83.98	82.53
GSMUA_Achr5P11610_001	Banana	cytosol	78.71	80.28
VIT_03s0038g03270.t01	Wine grape	cytosol	76.56	78.4
GSMUA_Achr4P29650_001	Banana	cytosol	76.76	78.29
CDX69121	Canola	cytosol	76.37	77.27
GSMUA_Achr5P19040_001	Banana	plasma membrane	78.32	76.97
CDX75483	Canola	cytosol	76.17	76.47
Bra011596.1-P	Field mustard	cytosol	76.17	76.17
Bra020806.1-P	Field mustard	cytosol	75.39	76.13
CDX76321	Canola	cytosol	75.39	76.13
AT4G35230.1	Thale cress	cytosol	75.98	75.98
CDY17529	Canola	cytosol	75.0	75.74
GSMUA_Achr8P13240_001	Banana	cytosol, plastid	75.59	75.44
KRH14029	Soybean	cytosol	73.05	75.25
Zm00001d029785_P001	Maize	plastid	81.45	74.87
KRH74087	Soybean	mitochondrion	73.83	74.26
Zm00001d030021_P001	Maize	cytosol	58.4	59.21
Zm00001d026653_P004	Maize	plasma membrane	56.05	57.86
Zm00001d001780_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	56.64	56.53
Zm00001d047053_P004	Maize	cytosol	58.2	56.02
GSMUA_Achr1P02160_001	Banana	cytosol	59.18	55.9
Zm00001d012931_P001	Maize	plasma membrane	49.02	51.12
Zm00001d034689_P003	Maize	plastid	48.83	50.92
Bra034987.1-P	Field mustard	cytosol	15.04	47.53

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.10	EntrezGene:100273485	MapMan:11.3.2.1.5	MapMan:18.4.1.42	MapMan:26.8.1.1.4
Gene3D:3.30.200.20	UniProt:B4FVV1	EMBL:BT041239	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR011990	InterPro:Kinase-like_dom_sf	ProteinID:ONL93366.1
PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF41	InterPro:Prot_kinase_dom	SUPFAM:SSF48452
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00017B7FAA	EnsemblPlantsGene:Zm00001d027523	EnsemblPlants:Zm00001d027523_P001
EnsemblPlants:Zm00001d027523_T001	SEG:seg	:	:	:	:

Description

Probable serine/threonine-protein kinase

Coordinates

chr1:+:7394984..7399427

Molecular Weight (calculated)

57374.3 Da

IEP (calculated)

6.923

GRAVY (calculated)

-0.532

Length

512 amino acids

Sequence
(BLAST)

001: MGCCGSSQRA GTHPEKKPPG ALPPHRPSYS LNQHQAPAPP PPSAARAGAR QVPPLKEFSL AELRAATAGF AAGNIVSESG EKAPNFVYRG RLDAGRRAIA
101: VKKFTKMAWP DPKQFAEEAK GVGKLRHCRL ANLIGYCCDG DERLLVAEFM PNDTLAKHLF HWENQTIEWA MRLRVAYYIA EALEYCSTEG RPLYHDLNAY
201: RVLFDENGDP RLSCFGLMKN SRDGKSYSTN LAYTPPEYLR NGRVTSESVI FSFGTILLDL LSGKRIPPSR ALDMIKGNNI QVLMDSHLEG NYSTDEATTL
301: VDLASQCLQY EPRDRANTKK LVSVLEPLQI KSEVPSYEML GIPKHEEEAP PPPQPQRPLS PMGEACSRTD LTAIHQILVN THYRDDEGSN ELSFQEWTQQ
401: MRDMLEARKR GDFAFRDKDF KAAIDCYTQF VDVGTMVSPT VYARRSLCHL MCDQPDAALR DAMQAQCVYP DWPTAFYMQA VALAKLNMQS DATDMLNEAS
501: QLEEKRQKNT KP

Best Arabidopsis Sequence Match ( AT4G35230.1 )
(BLAST)

001: MGCCQSLFSG DNPLGKDGVQ PQPLSQNNHG GATTADNGGS GGASGVGGGG GGGGIPSFSE FSFADLKAAT NNFSSDNIVS ESGEKAPNLV YKGRLQNRRW
101: IAVKKFTKMA WPEPKQFAEE AWGVGKLRHN RLANLIGYCC DGDERLLVAE FMPNDTLAKH LFHWENQTIE WAMRLRVGYY IAEALDYCST EGRPLYHDLN
201: AYRVLFDEDG DPRLSCFGLM KNSRDGKSYS TNLAYTPPEY LRNGRVTPES VTYSFGTVLL DLLSGKHIPP SHALDMIRGK NIILLMDSHL EGKFSTEEAT
301: VVVELASQCL QYEPRERPNT KDLVATLAPL QTKSDVPSYV MLGIKKQEEA PSTPQRPLSP LGEACSRMDL TAIHQILVMT HYRDDEGTNE LSFQEWTQQM
401: KDMLDARKRG DQSFREKDFK TAIDCYSQFI DVGTMVSPTV FGRRSLCYLL CDQPDAALRD AMQAQCVYPD WPTAFYMQSV ALAKLNMNTD AADMLNEAAQ
501: LEEKRQRGGR GS

Arabidopsis Description

BSK1Probable serine/threonine-protein kinase At4g35230 [Source:UniProtKB/Swiss-Prot;Acc:Q944A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.